Fine mapping of a cdt locus mutation that leads to increased cadmium tolerance



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Abstract

A pea mutant SGECdt (cdt), which has an increased cadmium tolerance and an increased cadmium accumulation, as compared to the initial line, was recently obtained. Earlier, a SSAP (sequence specific amplified polymorphism) analysis revealed localization of the cdt locus in VI linkage group. For fine mapping of the cdt locus a set of PCR based markers was developed. PCR markers were based on known sequences of pea genes, which were determined using analysis of genome microsynteny between pea and model legume Medicago truncatula. The close linkage of the cdt locus and markers based on the Pentatricopeptide repeat and Exosome complex exonuclease RRP 45 genes was revealed. Thus, prerequisites for cdt positional cloning were developed.

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About the authors

Olga A Kulaeva

All-Russia Research Institute for Agricultural Microbiology, Saint-Petersburg, RF

Email: koa1983@yandex.ru Podbelskiy chausse, 3, Saint-Petersburg, Pushkin, 196608, Russia

Viktor E Tsyganov

All-Russia Research Institute for Agricultural Microbiology, Saint-Petersburg, RF

Email: viktor_tsyganov@arriam.spb.ru

References

  1. Кулаева О. А., Цыганов В. Е., 2010. Молекулярно-генетические основы устойчивости высших растений к кадмию и его аккумуляции//Экол. генетика. Т. 8. С. 3-15.
  2. Цыганов В. Е., Кулаева О. А., Нокс М., и др., 2012. Использование SSAP анализа для первичной локализации мутации cdt (cadmium tolerance) в VI группе сцепления гороха//Экол. генетика. Т. X, N 1. С. 42-46.
  3. Aubert G., Morin J., Jacquin F. et al., 2006. Functional mapping in pea, as an aid to the candidate gene selection and for investigating synteny with the model legume Medicago truncatula//Theor. Appl. Genet. Vol. 112. P. 1024-1041.
  4. Belimov A. A., Safronova V. I., Tsyganov V. E. et al., 2003. Genetic variability in tolerance to cadmium and accumulation of heavy metals in pea (Pisum sativum L.)//Euphytica. Vol. 131. P. 25-35.
  5. Cobbett C. S., May M. J., Howden R., Rolls B., 1998. The glutathione-deficient, cadmium-sensitive mutant, cad2-1, of Arabidopsis thaliana is deficient in γ-glutamylcysteine synthetase//The Plant J. Vol. 16. P. 73-78.
  6. Dellaporta S., Wood J., 1983. Plant DNA minipreparation//Plant Mol. Biol. Rep. Vol. 1. P. 19-21.
  7. Ellis T., Poyser S., 2002. An integrated and comparative view of pea genetic and cytogenetic maps//New Phytol. Vol. 153. P. 17-25.
  8. Flavell R., Bennett M., Smith J., Smith D., 1974. Genome size and the proportion of repeated nucleotide sequence DNA in plants//Biochem. Genet. Vol. 4. P. 257-269.
  9. Greshoff P. M., 2005. Positional Cloning of Plant Developmental Genes//The Handbook of Plant Genome Mapping. Genetic and Physical Mapping/Eds.: Meksem K. and Kahl G. Wiley-VCH, Weinheim. P. 233-256.
  10. Graham L., Sticklen B., 1993. Plant chitinases//Can. J. Bot. Vol. 72. P. 1057-1083.
  11. Howden R., Goldsbrough P. B., Andersen C. R., Cobbett C. S., 1995. Cadmium-sensitive, cad1 mutants of Arabidopsis thaliana are phytochelatin deficient//Plant Physiol. Vol. 107. P. 1059-1066.
  12. Ha S., Howden R., Dietrich W., Bugg S., 1999. Phytochelatin synthase genes from arabidopsis and the yeast Schizosaccharomyces pombe//Plant Cell. Vol. 11. P. 1153-1163.
  13. Iwata H., Ninomiya S., 2006. AntMap: Constructing genetic linkage maps using an ant colony optimization algorithm//Breed. Sci. Vol. 56. P. 371-377.
  14. Jander G., Norris S., Rounsley S. et al., 2002. Arabidopsis map based cloning in the post genome era//Plant Physiol. Vol. 129. P. 440 450.
  15. Kaló P., Seres A., Taylor S. et al., 2004. Comparative mapping between Medicago sativa and Pisum sativum//Mol. Genet. Genomics. Vol. 272. P. 235-246.
  16. Murray M., Peters D., Thompson W., 1981. Ancient repeated sequences in the pea and mung bean genomes and implications for genome evolution//J. Sci. Food Agr. Vol. 17. P. 31-42.
  17. Neff M., Turk E., Kalishman M., 2002. Web based primer design for single nucleotide polymorphism analysis//Trends Genet. Vol. 18. P. 613-615.
  18. Sanita di Toppi L., Gabbrielli R., 1999. Response to cadmium in higher plants//Environ. Exp. Bot. Vol. 41. P.105-130.
  19. Sharma S., Dietz K., 2006. The significance of amino acids and amino acid-derived molecules in plant responses and adaptation to heavy metal stress//J. Exp. Bot. Vol. 57. P. 711-726.
  20. Tattersall A.D., Turner L., Knox M. R. et al., 2005. The Mutant crispa reveals multiple roles for PHANTASTICA in pea compound leaf development//Plant Cell. Vol. 17. P. 1046-1060.
  21. Tsyganov V., Belimov A., Borisov A. et al, 2007. A chemically induced new pea (Pisum sativum) mutant SGECdt with increased tolerance to, and accumulation of, cadmium//Ann. Bot. London. Vol. 99. P. 227-237.
  22. Watanabe A., Ito H., Chiba M. et al., 2010. Isolation of novel types of Arabidopsis mutants with altered reactions to cadmium: cadmium gradient agar plates are an effective screen for the heavy metal related mutants//Planta. Vol. 232. P. 825-836.

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