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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Current Pharmaceutical Design</journal-id><journal-title-group><journal-title xml:lang="en">Current Pharmaceutical Design</journal-title><trans-title-group xml:lang="ru"><trans-title>Current Pharmaceutical Design</trans-title></trans-title-group></journal-title-group><issn publication-format="print">1381-6128</issn><issn publication-format="electronic">1873-4286</issn><publisher><publisher-name xml:lang="en">Bentham Science</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">645784</article-id><article-id pub-id-type="doi">10.2174/0113816128296376240424072322</article-id><article-categories><subj-group subj-group-type="toc-heading"><subject>Immunology, Inflammation &amp;amp; Allergy</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Endothelial-specific Enhancer as a Cis Element of PLAUR Regulation by TNF-alpha, IL-1beta, and VEGF</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Penkov</surname><given-names>Dmitry</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name><surname>Beloglazova</surname><given-names>Irina</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name><surname>Parfyonova</surname><given-names>Yelena</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff1"/></contrib></contrib-group><aff id="aff1"><institution>Laboratory of Angiogenesis, Institute of Experimental Cardiology Named after Academician V.N. Smirnov, Federal State Budgetary Institution National Medical Research Center of Cardiology Named after Academician E.I. Chazov, Ministry of Health of the Russian Federation</institution></aff><pub-date date-type="pub" iso-8601-date="2024-06-01" publication-format="electronic"><day>01</day><month>06</month><year>2024</year></pub-date><volume>30</volume><issue>21</issue><issue-title xml:lang="ru"/><fpage>1630</fpage><lpage>1640</lpage><history><date date-type="received" iso-8601-date="2025-01-11"><day>11</day><month>01</month><year>2025</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2024, Bentham Science Publishers</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="en">Bentham Science Publishers</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/></permissions><self-uri xlink:href="https://journals.eco-vector.com/1381-6128/article/view/645784">https://journals.eco-vector.com/1381-6128/article/view/645784</self-uri><abstract xml:lang="en"><p id="idm46466589589808">:The expression of human PLAUR gene, which encodes the urokinase plasminogen activator receptor (uPAR), is cell- and process-specific and elevated in inflammation, cancer and senescence. Its tight regulation is achieved by regulatory elements in the gene locus, such as the promoter and several enhancers. The promoter activity is not specific to a particular cell type and has been described earlier. The proximal enhancer is endothelial-specific and responsible for the PLAUR expression pattern in endothelial cells. In this study we described the enhancer activity and its cis-regulatory elements based on the published data. We showed a possible connection of the enhancer activity with known cellular phenotypes.</p></abstract><kwd-group xml:lang="en"><kwd>PLAUR</kwd><kwd>uPAR</kwd><kwd>VEGF</kwd><kwd>IL-1beta</kwd><kwd>TNF-alpha</kwd><kwd>cancer.</kwd></kwd-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Stoppelli MP, Corti A, Soffientini A, Cassani G, Blasi F, Assoian RK. Differentiation-enhanced binding of the amino-terminal fragment of human urokinase plasminogen activator to a specific receptor on U937 monocytes. Proc Natl Acad Sci 1985; 82(15): 4939-43. doi: 10.1073/pnas.82.15.4939 PMID: 2991901</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Vassalli JD, Baccino D, Belin D. A cellular binding site for the Mr 55,000 form of the human plasminogen activator, urokinase. J Cell Biol 1985; 100(1): 86-92. doi: 10.1083/jcb.100.1.86 PMID: 3880760</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>Mondino A, Blasi F. uPA and uPAR in fibrinolysis, immunity and pathology. Trends Immunol 2004; 25(8): 450-5. doi: 10.1016/j.it.2004.06.004 PMID: 15275645</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>Ismail AA, Shaker BT, Bajou K. The plasminogenactivator plasmin system in physiological and pathophysiological angiogenesis. Int J Mol Sci 2021; 23(1): 337. doi: 10.3390/ijms23010337 PMID: 35008762</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Ellis V, Wun TC, Behrendt N, Rønne E, Danø K. Inhibition of receptor-bound urokinase by plasminogen-activator inhibitors. J Biol Chem 1990; 265(17): 9904-8. doi: 10.1016/S0021-9258(19)38757-5 PMID: 2161846</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Blasi F. uPA, uPAR, PAI-I: Key intersection of proteolytic, adhesive and chemotacfic highways? Immunol Today 1997; 18(9): 415-7. doi: 10.1016/S0167-5699(97)01121-3 PMID: 9293155</mixed-citation></ref><ref id="B7"><label>7.</label><mixed-citation>Cubellis MV, Wun TC, Blasi F. Receptor-mediated internalization and degradation of urokinase is caused by its specific inhibitor PAI-1. EMBO J 1990; 9(4): 1079-85. doi: 10.1002/j.1460-2075.1990.tb08213.x PMID: 2157592</mixed-citation></ref><ref id="B8"><label>8.</label><mixed-citation>Herz J, Clouthier DE, Hammer RE. LDL receptor-related protein internalizes and degrades uPA-PAI-1 complexes and is essential for embryo implantation. Cell 1992; 71(3): 411-21. doi: 10.1016/0092-8674(92)90511-A PMID: 1423604</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Nykjar A, Conese M, Christensen EI, et al. Recycling of the urokinase receptor upon internalization of the uPA:serpin complexes. EMBO J 1997; 16(10): 2610-20. doi: 10.1093/emboj/16.10.2610 PMID: 9184208</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Kanse SM, Kost C, Wilhelm OG, Andreasen PA, Preissner KT. The urokinase receptor is a major vitronectin-binding protein on endothelial cells. Exp Cell Res 1996; 224(2): 344-53. doi: 10.1006/excr.1996.0144 PMID: 8612711</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>Madsen CD, Sidenius N. The interaction between urokinase receptor and vitronectin in cell adhesion and signalling. Eur J Cell Biol 2008; 87(8-9): 617-29. doi: 10.1016/j.ejcb.2008.02.003 PMID: 18353489</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Wei Y, Lukashev M, Simon DI, et al. Regulation of integrin function by the urokinase receptor. Science 1996; 273(5281): 1551-5. doi: 10.1126/science.273.5281.1551 PMID: 8703217</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>Yu S, Sui Y, Wang J, et al. Crystal structure and cellular functions of uPAR dimer. Nat Commun 2022; 13(1): 1665. doi: 10.1038/s41467-022-29344-y PMID: 35351875</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>DAlessio S, Blasi F. The urokinase receptor as an entertainer of signal transduction. Front Biosci 2009; Volume(14): 4575-87. doi: 10.2741/3550 PMID: 19273372</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>Madunić J. The urokinase plasminogen activator system in human cancers: An overview of its prognostic and predictive role. Thromb Haemost 2018; 118(12): 2020-36. doi: 10.1055/s-0038-1675399 PMID: 30419600</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Dass K, Ahmad A, Azmi AS, Sarkar SH, Sarkar FH. Evolving role of uPA/uPAR system in human cancers. Cancer Treat Rev 2008; 34(2): 122-36. doi: 10.1016/j.ctrv.2007.10.005 PMID: 18162327</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Alfano D, Franco P, Stoppelli MP. Modulation of cellular function by the urokinase receptor signalling: A mechanistic view. Front Cell Dev Biol 2022; 10: 818616. doi: 10.3389/fcell.2022.818616 PMID: 35493073</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Metrangolo V, Ploug M, Engelholm LH. The Urokinase Receptor (uPAR) as a "Trojan Horse" in targeted cancer therapy: Challenges and opportunities. Cancers 2021; 13(21): 5376.</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Lv T, Zhao Y, Jiang X, et al. uPAR: An essential factor for tumor development. J Cancer 2021; 12(23): 7026-40. doi: 10.7150/jca.62281 PMID: 34729105</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Li Santi A, Napolitano F, Montuori N, Ragno P. The urokinase receptor: A multifunctional receptor in cancer cell biology. Therapeutic implications. Int J Mol Sci 2021; 22(8): 4111. doi: 10.3390/ijms22084111 PMID: 33923400</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Rømer J, Lund LR, Eriksen J, Pyke C, Kristensen P, Danø K. The receptor for urokinase-type plasminogen activator is expressed by keratinocytes at the leading edge during re-epithelialization of mouse skin wounds. J Invest Dermatol 1994; 102(4): 519-22. doi: 10.1111/1523-1747.ep12373187 PMID: 8151132</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>del Toro R, Prahst C, Mathivet T, et al. Identification and functional analysis of endothelial tip cellenriched genes. Blood 2010; 116(19): 4025-33. doi: 10.1182/blood-2010-02-270819 PMID: 20705756</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Brunner PM, Heier PC, Mihaly-Bison J, Priglinger U, Binder BR, Prager GW. Density enhanced phosphatase-1 down-regulates urokinase receptor surface expression in confluent endothelial cells. Blood 2011; 117(15): 4154-61. doi: 10.1182/blood-2010-09-307694 PMID: 21304107</mixed-citation></ref><ref id="B24"><label>24.</label><mixed-citation>Rubina KA, Sysoeva VY, Zagorujko EI, et al. Increased expression of uPA, uPAR, and PAI-1 in psoriatic skin and in basal cell carcinomas. Arch Dermatol Res 2017; 309(6): 433-42. doi: 10.1007/s00403-017-1738-z PMID: 28429105</mixed-citation></ref><ref id="B25"><label>25.</label><mixed-citation>Kanno Y. The uPA/uPAR system orchestrates the inflammatory response, vascular homeostasis, and immune system in fibrosis progression. Int J Mol Sci 2023; 24(2): 1796. doi: 10.3390/ijms24021796 PMID: 36675310</mixed-citation></ref><ref id="B26"><label>26.</label><mixed-citation>Amor C, Feucht J, Leibold J, et al. Senolytic CAR T cells reverse senescence-associated pathologies. Nature 2020; 583(7814): 127-32. doi: 10.1038/s41586-020-2403-9 PMID: 32555459</mixed-citation></ref><ref id="B27"><label>27.</label><mixed-citation>Li JH, Chen YY. A fresh approach to targeting aging cells: CAR-T cells enhance senolytic specificity. Cell Stem Cell 2020; 27(2): 192-4. doi: 10.1016/j.stem.2020.07.010 PMID: 32763179</mixed-citation></ref><ref id="B28"><label>28.</label><mixed-citation>Carmeliet P, Jain RK. Molecular mechanisms and clinical applications of angiogenesis. Nature 2011; 473(7347): 298-307. doi: 10.1038/nature10144 PMID: 21593862</mixed-citation></ref><ref id="B29"><label>29.</label><mixed-citation>Luttun A, Carmeliet P. De novo vasculogenesis in the heart. Cardiovasc Res 2003; 58(2): 378-89. doi: 10.1016/S0008-6363(03)00258-X PMID: 12757872</mixed-citation></ref><ref id="B30"><label>30.</label><mixed-citation>Lijnen HR. Elements of the fibrinolytic system. Ann N Y Acad Sci 2001; 936(1): 226-36. doi: 10.1111/j.1749-6632.2001.tb03511.x PMID: 11460480</mixed-citation></ref><ref id="B31"><label>31.</label><mixed-citation>Liu G, Chen T, Ding Z, Wang Y, Wei Y, Wei X. Inhibition of FGF-FGFR and VEGF-VEGFR signalling in cancer treatment. Cell Prolif 2021; 54(4): e13009. doi: 10.1111/cpr.13009 PMID: 33655556</mixed-citation></ref><ref id="B32"><label>32.</label><mixed-citation>Apte RS, Chen DS, Ferrara N. VEGF in signaling and disease: Beyond discovery and development. Cell 2019; 176(6): 1248-64. doi: 10.1016/j.cell.2019.01.021 PMID: 30849371</mixed-citation></ref><ref id="B33"><label>33.</label><mixed-citation>Ferrara N, Gerber HP, LeCouter J. The biology of VEGF and its receptors. Nat Med 2003; 9(6): 669-76. doi: 10.1038/nm0603-669 PMID: 12778165</mixed-citation></ref><ref id="B34"><label>34.</label><mixed-citation>Melincovici CS, Bo AB, Mihu C, Istrate M. Vascular endothelial growth factor (VEGF)  Key factor in normal and pathological angiogenesis. Rom J Morphol Embryol 2018; 59(2): 455-67.</mixed-citation></ref><ref id="B35"><label>35.</label><mixed-citation>Prager GW, Breuss JM, Steurer S, Mihaly J, Binder BR. Vascular endothelial growth factor (VEGF) induces rapid prourokinase (pro-uPA) activation on the surface of endothelial cells. Blood 2004; 103(3): 955-62. doi: 10.1182/blood-2003-07-2214 PMID: 14525763</mixed-citation></ref><ref id="B36"><label>36.</label><mixed-citation>Blasi F, Carmeliet P. uPAR: A versatile signalling orchestrator. Nat Rev Mol Cell Biol 2002; 3(12): 932-43. doi: 10.1038/nrm977 PMID: 12461559</mixed-citation></ref><ref id="B37"><label>37.</label><mixed-citation>Zhao R, Le K, Moghadasian MH, Shen GX. Reduced monocyte adhesion to aortae of diabetic plasminogen activator inhibitor-1 knockout mice. Inflamm Res 2017; 66(9): 783-92. doi: 10.1007/s00011-017-1057-z PMID: 28550522</mixed-citation></ref><ref id="B38"><label>38.</label><mixed-citation>Raghu H, Lakka SS, Gondi CS, et al. Suppression of uPA and uPAR attenuates angiogenin mediated angiogenesis in endothelial and glioblastoma cell lines. PLoS One 2010; 5(8): e12458. doi: 10.1371/journal.pone.0012458 PMID: 20805979</mixed-citation></ref><ref id="B39"><label>39.</label><mixed-citation>Alexander RA, Prager GW, Mihaly-Bison J, et al. VEGF-induced endothelial cell migration requires urokinase receptor (uPAR)-dependent integrin redistribution. Cardiovasc Res 2012; 94(1): 125-35. doi: 10.1093/cvr/cvs017 PMID: 22287577</mixed-citation></ref><ref id="B40"><label>40.</label><mixed-citation>Unseld M, Chilla A, Pausz C, et al. PTEN expression in endothelial cells is down-regulated by uPAR to promote angiogenesis. Thromb Haemost 2015; 114(8): 379-89. doi: 10.1160/TH15-01-0016 PMID: 25925849</mixed-citation></ref><ref id="B41"><label>41.</label><mixed-citation>Trisciuoglio D, Iervolino A, Candiloro A, et al. bcl-2 induction of urokinase plasminogen activator receptor expression in human cancer cells through Sp1 activation: Involvement of ERK1/ERK2 activity. J Biol Chem 2004; 279(8): 6737-45. doi: 10.1074/jbc.M308938200 PMID: 14660675</mixed-citation></ref><ref id="B42"><label>42.</label><mixed-citation>Margheri F, Chillà A, Laurenzana A, et al. Endothelial progenitor celldependent angiogenesis requires localization of the full-length form of uPAR in caveolae. Blood 2011; 118(13): 3743-55. doi: 10.1182/blood-2011-02-338681 PMID: 21803847</mixed-citation></ref><ref id="B43"><label>43.</label><mixed-citation>Herkenne S, Paques C, Nivelles O, et al. The interaction of uPAR with VEGFR2 promotes VEGF-induced angiogenesis. Sci Signal 2015; 8(403): ra117-7. doi: 10.1126/scisignal.aaa2403 PMID: 26577922</mixed-citation></ref><ref id="B44"><label>44.</label><mixed-citation>Mahabeleshwar GH, Feng W, Reddy K, Plow EF, Byzova TV. Mechanisms of integrin-vascular endothelial growth factor receptor cross-activation in angiogenesis. Circ Res 2007; 101(6): 570-80. doi: 10.1161/CIRCRESAHA.107.155655 PMID: 17641225</mixed-citation></ref><ref id="B45"><label>45.</label><mixed-citation>Dewerchin M, Nuffelen AV, Wallays G, et al. Generation and characterization of urokinase receptor-deficient mice. J Clin Invest 1996; 97(3): 870-8. doi: 10.1172/JCI118489 PMID: 8609247</mixed-citation></ref><ref id="B46"><label>46.</label><mixed-citation>Dergilev KV, Beloglazova IB, Tsokolaeva ZI, Vasilets YD, Parfenova EV. Deficiency of urokinase-type plasminogen activator receptor is associated with the development of perivascular fibrosis in mouse heart. Bull Exp Biol Med 2022; 173(1): 5-9. doi: 10.1007/s10517-022-05480-9 PMID: 35622258</mixed-citation></ref><ref id="B47"><label>47.</label><mixed-citation>Manetti M, Rosa I, Fazi M, et al. Systemic sclerosis-like histopathological features in the myocardium of uPAR-deficient mice. Ann Rheum Dis 2016; 75(2): 474-8. doi: 10.1136/annrheumdis-2015-207803 PMID: 26269399</mixed-citation></ref><ref id="B48"><label>48.</label><mixed-citation>Balsara RD, Merryman R, Virjee F, Northway C, Castellino FJ, Ploplis VA. A deficiency of uPAR alters endothelial angiogenic function and cell morphology. Vasc Cell 2011; 3(1): 10. doi: 10.1186/2045-824X-3-10 PMID: 21535874</mixed-citation></ref><ref id="B49"><label>49.</label><mixed-citation>Casey JR, Petranka JG, Kottra J, Fleenor DE, Rosse WF. The structure of the urokinase-type plasminogen activator receptor gene. Blood 1994; 84(4): 1151-6. doi: 10.1182/blood.V84.4.1151.1151 PMID: 8049431</mixed-citation></ref><ref id="B50"><label>50.</label><mixed-citation>Pyke C, Eriksen J, Solberg H, et al. An alternatively spliced variant of mRNA for the human receptor for urokinase plasminogen activator. FEBS Lett 1993; 326(1-3): 69-74. doi: 10.1016/0014-5793(93)81763-P PMID: 8392005</mixed-citation></ref><ref id="B51"><label>51.</label><mixed-citation>Choong PFM, Nadesapillai APW. Urokinase plasminogen activator system: A multifunctional role in tumor progression and metastasis. Clin Orthop Relat Res 2003; 415(415): S46-58. doi: 10.1097/01.blo0000093845.72468.bd PMID: 14600592</mixed-citation></ref><ref id="B52"><label>52.</label><mixed-citation>Wang H, Yan C, Asangani I, Allgayer H, Boyd DD. Identification of an histone H3 acetylated/K4-methylated-bound intragenic enhancer regulatory for urokinase receptor expression. Oncogene 2007; 26(14): 2058-70. doi: 10.1038/sj.onc.1210003 PMID: 17001307</mixed-citation></ref><ref id="B53"><label>53.</label><mixed-citation>Wang H, Yang L, Jamaluddin MS, Boyd DD. The Kruppel-like KLF4 transcription factor, a novel regulator of urokinase receptor expression, drives synthesis of this binding site in colonic crypt luminal surface epithelial cells. J Biol Chem 2004; 279(21): 22674-83. doi: 10.1074/jbc.M401257200 PMID: 15031282</mixed-citation></ref><ref id="B54"><label>54.</label><mixed-citation>Li C, Xu Q. Mechanical stress-initiated signal transductions in vascular smooth muscle cells. Cell Signal 2000; 12(7): 435-45. doi: 10.1016/S0898-6568(00)00096-6 PMID: 10989277</mixed-citation></ref><ref id="B55"><label>55.</label><mixed-citation>Goel HL, Mercurio AM. VEGF targets the tumour cell. Nat Rev Cancer 2013; 13(12): 871-82. doi: 10.1038/nrc3627 PMID: 24263190</mixed-citation></ref><ref id="B56"><label>56.</label><mixed-citation>Wang Y, Jones CJ, Dang J, Liang X, Olsen JE, Doe WF. Human urokinase receptor expression is inhibited by amiloride and induced by tumor necrosis factor and phorbol ester in colon cancer cells. FEBS Lett 1994; 353(2): 138-42. doi: 10.1016/0014-5793(94)01032-3 PMID: 7926038</mixed-citation></ref><ref id="B57"><label>57.</label><mixed-citation>Nykjaer A, Møller B, Todd RF III, et al. Urokinase receptor. An activation antigen in human T lymphocytes. J Immunol 1994; 152(2): 505-16. doi: 10.4049/jimmunol.152.2.505 PMID: 8283034</mixed-citation></ref><ref id="B58"><label>58.</label><mixed-citation>Plesner T, Ploug M, Ellis V, et al. The receptor for urokinase-type plasminogen activator and urokinase is translocated from two distinct intracellular compartments to the plasma membrane on stimulation of human neutrophils. Blood 1994; 83(3): 808-15. doi: 10.1182/blood.V83.3.808.808 PMID: 8298141</mixed-citation></ref><ref id="B59"><label>59.</label><mixed-citation>Langer DJ, Kuo A, Kariko K, et al. Regulation of the endothelial cell urokinase-type plasminogen activator receptor. Evidence for cyclic AMP-dependent and protein kinase C-dependent pathways. Circ Res 1993; 72(2): 330-40. doi: 10.1161/01.RES.72.2.330 PMID: 7678205</mixed-citation></ref><ref id="B60"><label>60.</label><mixed-citation>Dang J, Wang Y, Doe WF. Sodium butyrate inhibits expression of urokinase and its receptor mRNAs at both transcription and post-transcription levels in colon cancer cells. FEBS Lett 1995; 359(2-3): 147-50. doi: 10.1016/0014-5793(95)00029-9 PMID: 7867787</mixed-citation></ref><ref id="B61"><label>61.</label><mixed-citation>Lund LR, Rønne E, Roldan AL, et al. Urokinase receptor mRNA level and gene transcription are strongly and rapidly increased by phorbol myristate acetate in human monocyte-like U937 cells. J Biol Chem 1991; 266(8): 5177-81. doi: 10.1016/S0021-9258(19)67771-9 PMID: 1848242</mixed-citation></ref><ref id="B62"><label>62.</label><mixed-citation>Sitrin RG, Todd RF III, Mizukami IF, Gross TJ, Shollenberger SB, Gyetko MR. Cytokine-specific regulation of urokinase receptor (CD87) expression by U937 mononuclear phagocytes. Blood 1994; 84(4): 1268-75. PMID: 8049441</mixed-citation></ref><ref id="B63"><label>63.</label><mixed-citation>Kirchheimer JC, Nong YH, Remold HG. IFN-gamma, tumor necrosis factor-alpha, and urokinase regulate the expression of urokinase receptors on human monocytes. J Immunol 1988; 141(12): 4229-34. doi: 10.4049/jimmunol.141.12.4229 PMID: 2848891</mixed-citation></ref><ref id="B64"><label>64.</label><mixed-citation>Büchler P, Reber HA, Tomlinson JS, et al. Transcriptional regulation of urokinase-type plasminogen activator receptor by hypoxia-inducible factor 1 is crucial for invasion of pancreatic and liver cancer. Neoplasia 2009; 11(2): 196-IN12. doi: 10.1593/neo.08734 PMID: 19177204</mixed-citation></ref><ref id="B65"><label>65.</label><mixed-citation>Wang Y. The role and regulation of urokinase-type plasminogen activator receptor gene expression in cancer invasion and metastasis. Med Res Rev 2001; 21(2): 146-70. doi: 10.1002/1098-1128(200103)21:23.0.CO;2-B PMID: 11223863</mixed-citation></ref><ref id="B66"><label>66.</label><mixed-citation>Soravia E, Grebe A, De Luca P, et al. A conserved TATA-less proximal promoter drives basal transcription from the urokinase- type plasminogen activator receptor gene. Blood 1995; 86(2): 624-35. doi: 10.1182/blood.V86.2.624.bloodjournal862624 PMID: 7605992</mixed-citation></ref><ref id="B67"><label>67.</label><mixed-citation>Haun RS, Moss J, Vaughan M. Characterization of the human ADP-ribosylation factor 3 promoter. Transcriptional regulation of a TATA-less promoter. J Biol Chem 1993; 268(12): 8793-800. doi: 10.1016/S0021-9258(18)52944-6 PMID: 8473323</mixed-citation></ref><ref id="B68"><label>68.</label><mixed-citation>Chen X, Xu Y. Structural insights into assembly of transcription preinitiation complex. Curr Opin Struct Biol 2022; 75: 102404. doi: 10.1016/j.sbi.2022.102404 PMID: 35700575</mixed-citation></ref><ref id="B69"><label>69.</label><mixed-citation>Kaczynski J, Cook T, Urrutia R. Sp1- and Krüppel-like transcription factors. Genome Biol 2003; 4(2): 206. doi: 10.1186/gb-2003-4-2-206 PMID: 12620113</mixed-citation></ref><ref id="B70"><label>70.</label><mixed-citation>(a) Lee CM, Barber GP, Casper J, et al. UCSC genome browser enters 20th year. Nucleic Acids Res 2019; 48(D1): gkz1012. doi: 10.1093/nar/gkz1012 PMID: 31691824; (b) Raney BJ, Barber GP, Pagès BA, et al. The UCSC genome browser database: 2024 update. Nucleic Acids Res 2023; 52: D1082-8. doi: 10.1093/nar/gkad987 PMID: 37953330; (c) Brown JD, Lin CY, Duan Q, et al. NF-κB directs dynamic super enhancer formation in inflammation and atherogenesis. Mol Cell 2014; 56(2): 219-31. doi: 10.1016/j.molcel.2014.08.024 PMID: 25263595</mixed-citation></ref><ref id="B71"><label>71.</label><mixed-citation>Linnemann AK, OGeen H, Keles S, Farnham PJ, Bresnick EH. Genetic framework for GATA factor function in vascular biology. Proc Natl Acad Sci 2011; 108(33): 13641-6. doi: 10.1073/pnas.1108440108 PMID: 21808000</mixed-citation></ref><ref id="B72"><label>72.</label><mixed-citation>Masquilier D, Corsi SP. Transcriptional cross-talk: nuclear factors CREM and CREB bind to AP-1 sites and inhibit activation by Jun. J Biol Chem 1992; 267(31): 22460-6. doi: 10.1016/S0021-9258(18)41694-8 PMID: 1429597</mixed-citation></ref><ref id="B73"><label>73.</label><mixed-citation>Kawasaki K, Fukaya T. Regulatory landscape of enhancer-mediated transcriptional activation. Trends Cell Biol 2024; 13: S0962-8924(24)00020-5. doi: 10.1016/j.tcb.2024.01.008 PMID: 38355349</mixed-citation></ref><ref id="B74"><label>74.</label><mixed-citation>Karpinska MA, Oudelaar AM. The role of loop extrusion in enhancer-mediated gene activation. Curr Opin Genet Dev 2023; 79: 102022. doi: 10.1016/j.gde.2023.102022 PMID: 36842325</mixed-citation></ref><ref id="B75"><label>75.</label><mixed-citation>Weintraub AS, Li CH, Zamudio AV, et al. YY1 is a structural regulator of enhancer-promoter loops. Cell 2017; 171(7): 1573-1588.e28. doi: 10.1016/j.cell.2017.11.008 PMID: 29224777</mixed-citation></ref><ref id="B76"><label>76.</label><mixed-citation>Zuin J, Roth G, Zhan Y, et al. Nonlinear control of transcription through enhancerpromoter interactions. Nature 2022; 604(7906): 571-7. doi: 10.1038/s41586-022-04570-y PMID: 35418676</mixed-citation></ref><ref id="B77"><label>77.</label><mixed-citation>Zhang S, Übelmesser N, Barbieri M, Papantonis A. Enhancerpromoter contact formation requires RNAPII and antagonizes loop extrusion. Nat Genet 2023; 55(5): 832-40. doi: 10.1038/s41588-023-01364-4 PMID: 37012454</mixed-citation></ref><ref id="B78"><label>78.</label><mixed-citation>Kubo N, Ishii H, Xiong X, et al. Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation. Nat Struct Mol Biol 2021; 28(2): 152-61. doi: 10.1038/s41594-020-00539-5 PMID: 33398174</mixed-citation></ref><ref id="B79"><label>79.</label><mixed-citation>(a) Pope BD, Ryba T, Dileep V, et al. Topologically associating domains are stable units of replication-timing regulation. Nature 2014; 515(7527): 402-5. doi: 10.1038/nature13986 PMID: 25409831; (b) Zhang B, Day DS, Ho JW, et al. A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity. Genome Res 2013; 23(6): 917-27. doi: 10.1101/gr.149674.112 PMID: 23547170</mixed-citation></ref><ref id="B80"><label>80.</label><mixed-citation>Ghouili F, Roumaud P, Martin LJ. Gja1 expression is regulated by cooperation between SOX8/SOX9 and cJUN transcription factors in TM4 and 15P-1 Sertoli cell lines. Mol Reprod Dev 2018; 85(11): 875-86. doi: 10.1002/mrd.23049 PMID: 30080944</mixed-citation></ref><ref id="B81"><label>81.</label><mixed-citation>Hogan NT, Whalen MB, Stolze LK, et al. Transcriptional networks specifying homeostatic and inflammatory programs of gene expression in human aortic endothelial cells. eLife 2017; 6: e22536. doi: 10.7554/eLife.22536 PMID: 28585919</mixed-citation></ref><ref id="B82"><label>82.</label><mixed-citation>Karin M, Lin A. NF-κB at the crossroads of life and death. Nat Immunol 2002; 3(3): 221-7. doi: 10.1038/ni0302-221 PMID: 11875461</mixed-citation></ref><ref id="B83"><label>83.</label><mixed-citation>Baud V, Karin M. Signal transduction by tumor necrosis factor and its relatives. Trends Cell Biol 2001; 11(9): 372-7. doi: 10.1016/S0962-8924(01)02064-5 PMID: 11514191</mixed-citation></ref><ref id="B84"><label>84.</label><mixed-citation>Vallabhapurapu S, Karin M. Regulation and function of NF-kappaB transcription factors in the immune system. Annu Rev Immunol 2009; 27(1): 693-733. doi: 10.1146/annurev.immunol.021908.132641 PMID: 19302050</mixed-citation></ref><ref id="B85"><label>85.</label><mixed-citation>Karin M. NF-kappaB as a critical link between inflammation and cancer. Cold Spring Harb Perspect Biol 2009; 1(5): a000141. doi: 10.1101/cshperspect.a000141 PMID: 20066113</mixed-citation></ref><ref id="B86"><label>86.</label><mixed-citation>Grivennikov SI, Kuprash DV, Liu ZG, Nedospasov SA. Intracellular signals and events activated by cytokines of the tumor necrosis factor superfamily: From simple paradigms to complex mechanisms. Int Rev Cytol 2006; 252: 129-61. doi: 10.1016/S0074-7696(06)52002-9 PMID: 16984817</mixed-citation></ref></ref-list></back></article>
