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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Current Computer-Aided Drug Design</journal-id><journal-title-group><journal-title xml:lang="en">Current Computer-Aided Drug Design</journal-title><trans-title-group xml:lang="ru"><trans-title>Current Computer-Aided Drug Design</trans-title></trans-title-group></journal-title-group><issn publication-format="print">1573-4099</issn><issn publication-format="electronic">1875-6697</issn><publisher><publisher-name xml:lang="en">Bentham Science</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">643926</article-id><article-id pub-id-type="doi">10.2174/1573409919666230418095958</article-id><article-categories><subj-group subj-group-type="toc-heading"><subject>Chemistry</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">In vitro Culture and Multilocus Genotyping of Giardia duodenalis Trophozoites Obtained from Human Fecal Samples in Southwest of Iran</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Yousefi</surname><given-names>Hossein Ali</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name><surname>Asgarian</surname><given-names>Fatemeh</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name><surname>Tavalla</surname><given-names>Mehdi</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name><surname>Ghafari</surname><given-names>Shokouh</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff3"/></contrib><contrib contrib-type="author"><name><surname>Kohansal</surname><given-names>Kobra</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff2"/></contrib></contrib-group><aff id="aff1"><institution>Department of Parasitology and Mycology, School of Medicine, Isfahan University of Medical Sciences</institution></aff><aff id="aff2"><institution>Department of Parasitology, School of Medicine, Ahvaz Jundishapur University of Medical Sciences</institution></aff><aff id="aff3"><institution>Cellular and Molecular Research Center, Faculty of Medicine, Shahrekord University of Medical Sciences</institution></aff><pub-date date-type="pub" iso-8601-date="2024-02-01" publication-format="electronic"><day>01</day><month>02</month><year>2024</year></pub-date><volume>20</volume><issue>2</issue><issue-title xml:lang="ru"/><fpage>145</fpage><lpage>154</lpage><history><date date-type="received" iso-8601-date="2025-01-07"><day>07</day><month>01</month><year>2025</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2024, Bentham Science Publishers</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="en">Bentham Science Publishers</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/></permissions><self-uri xlink:href="https://journals.eco-vector.com/1573-4099/article/view/643926">https://journals.eco-vector.com/1573-4099/article/view/643926</self-uri><abstract xml:lang="en"><p id="idm46041443814880">Introduction:The enteric protozoa, Giardia duodenalis (G. duodenalis), consists of eight distinct assemblages (A-H) with identical morphological characteristics and a direct life cycle. Successful axenic cultivation of this parasite is an important preliminary step for biological, drug resistance and phylogenetic studies. Moreover, G. duodenalis exhibits great genetic and biotypic diversity.</p><p id="idm46041443818880">Aim:The current study aimed to evaluate in vitro culture and multilocus genotyping of G. duodenalis trophozoites obtained from human fecal samples in southwest Iran.</p><p id="idm46041443822848">Methods:Thirty human fecal specimens containing G. duodenalis cysts were collected from Ahvaz city (southwest of Iran). The purification of cysts was carried out by the sucrose flotation technique. The cysts were inoculated in a modified TYI-S-33 medium and was daily monitored for the development and viability of trophozoites. After extracting DNA, gdh, bg and tpi genes were evaluated using molecular techniques (the semi-nested PCR for gdh gene and the nested PCR for tpi and bg genes). Eventually, the amplified fragments were sequenced and then, the phylogenetic tree was drawn.</p><p id="idm46041443827904">Results:Of 30, the trophozoites were encysted from five samples. All three genes were detected in two cases of five samples using molecular techniques. The multilocus phylogenetic analysis demonstrated that all the two samples belonged to assemblage A and sub-assemblage AІІ.</p><p id="idm46041443837280">Conclusion:Our findings indicated the presence of different numbers of trophozoites with variable development and survival rates in modified TYI-S-33 medium. Furthermore, the multilocus genotyping showed that these trophozoites belonged to assemblage A and sub-assemblage AІІ.</p></abstract><kwd-group xml:lang="en"><kwd>Axenic cultivation</kwd><kwd>&amp;lt</kwd><kwd>i&amp;amp</kwd><kwd>gt</kwd><kwd>Giardia duodenalis&amp;amp</kwd><kwd>lt</kwd><kwd>/i&amp;amp</kwd><kwd>gt</kwd><kwd>multilocus genotyping</kwd><kwd>nested-PCR</kwd><kwd>trophozoite</kwd><kwd>TYI-S-33.</kwd></kwd-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Squire, S.A.; Ryan, U. Cryptosporidium and Giardia in Africa: Current and future challenges. Parasit. Vectors, 2017, 10(1), 195. doi: 10.1186/s13071-017-2111-y PMID: 28427454</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Savioli, L.; Smith, H.; Thompson, A. Giardia and Cryptosporidium join the neglected diseases initiative. Trends Parasitol., 2006, 22(5), 203-208. doi: 10.1016/j.pt.2006.02.015 PMID: 16545611</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>Lujan, H.; D Svärd, S. Giardia: A model organism; Springer, 2011.</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>Feng, Y.; Xiao, L. Zoonotic potential and molecular epidemiology of Giardia species and giardiasis. Clin. Microbiol. Rev., 2011, 24(1), 110-140. doi: 10.1128/CMR.00033-10 PMID: 21233509</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Cacciò, S.M.; Thompson, R.C.A.; McLauchlin, J.; Smith, H.V. Unravelling Cryptosporidium and Giardia epidemiology. Trends Parasitol., 2005, 21(9), 430-437. doi: 10.1016/j.pt.2005.06.013 PMID: 16046184</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Sprong, H.; Cacciò, S.M.; van der Giessen, J.W.B. ZOOPNET network and partners. Identification of zoonotic genotypes of Giardia duodenalis. PLoS Negl. Trop. Dis., 2009, 3(12), e558. doi: 10.1371/journal.pntd.0000558 PMID: 19956662</mixed-citation></ref><ref id="B7"><label>7.</label><mixed-citation>Sulaiman, I.M.; Fayer, R.; Bern, C.; Gilman, R.H.; Trout, J.M.; Schantz, P.M.; Das, P.; Lal, A.A.; Xiao, L. Triosephosphate isomerase gene characterization and potential zoonotic transmission of Giardia duodenalis. Emerg. Infect. Dis., 2003, 9(11), 1444-1452. doi: 10.3201/eid0911.030084 PMID: 14718089</mixed-citation></ref><ref id="B8"><label>8.</label><mixed-citation>Chourabi, M.; Boughattas, S.; Abdallah, A.M.; Ismail, A.; Behnke, J.M.; Al-Mekhlafi, H.M.; Abu-Madi, M. Genetic diversity and prevalence of Giardia duodenalis in Qatar. Front. Cell. Infect. Microbiol., 2021, 11, 652946. doi: 10.3389/fcimb.2021.652946 PMID: 34017691</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Cacciò, S.M.; Ryan, U. Molecular epidemiology of giardiasis. Mol. Biochem. Parasitol., 2008, 160(2), 75-80. doi: 10.1016/j.molbiopara.2008.04.006 PMID: 18501440</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Solarczyk, P.; Majewska, A.; Słodkowicz-Kowalska, A. Axenic in vitro culture and molecular characterization of Giardia duodenalis from red deer (Cervus elaphus) and Thomsons gazelle (Gazella thomsonii). Acta Parasitol., 2014, 59(4), 763-766. doi: 10.2478/s11686-014-0279-2 PMID: 25236290</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>Bénéré, E.; Geurden, T.; Robertson, L.; Van Assche, T.; Cos, P.; Maes, L. Infectivity of Giardia duodenalis Assemblages A and E for the gerbil and axenisation of duodenal trophozoites. Parasitol. Int., 2010, 59(4), 634-637. doi: 10.1016/j.parint.2010.08.001 PMID: 20696269</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Visvesvara, G.S.; Garcia, L.S. Culture of protozoan parasites. Clin. Microbiol. Rev., 2002, 15(3), 327-328. doi: 10.1128/CMR.15.3.327-328.2002 PMID: 12097241</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>Safi, M.; Tavalla, M.; Mardani, M.; Afrisham, R. Prevalence of intestinal parasitic infections among applicants for health cards attending Ahvaz East Health Center during 2012-2013. Asian Pac. J. Trop. Dis., 2016, 6(2), 151-154. doi: 10.1016/S2222-1808(15)61002-7</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>Rayani, M.; Zasmy Unyah, N.; Hatam, G. Molecular identification of Giardia duodenalis isolates from Fars province, Iran. Iran. J. Parasitol., 2014, 9(1), 70-78. PMID: 25642262</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>Keister, D.B. Axenic culture of Giardia lamblia in TYI-S-33 medium supplemented with bile. Trans. R. Soc. Trop. Med. Hyg., 1983, 77(4), 487-488. doi: 10.1016/0035-9203(83)90120-7 PMID: 6636276</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Coradi, S.T.; David, E.B.; Oliveira-Sequeira, T.C.G.; Ribolla, P.E.M.; Carvalho, T.B.; Guimarães, S. Genotyping of Brazilian Giardia duodenalis human axenic isolates. J. Venom. Anim. Toxins Incl. Trop. Dis., 2011, 17(3), 353-357. doi: 10.1590/S1678-91992011000300016</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Costache, C.; Kalmár, Z.; Colosi, H.A.; Baciu, A.M.; Opriş, R.V.; Györke, A.; Colosi, I.A. First multilocus sequence typing (MLST) of Giardia duodenalis isolates from humans in Romania. Parasit. Vectors, 2020, 13(1), 387. doi: 10.1186/s13071-020-04248-2 PMID: 32736595</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Thompson, R.C.A. Giardiasis as a re-emerging infectious disease and its zoonotic potential. Int. J. Parasitol., 2000, 30(12-13), 1259-1267. doi: 10.1016/S0020-7519(00)00127-2 PMID: 11113253</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Haque, R.; Roy, S.; Kabir, M.; Stroup, S.E.; Mondal, D.; Houpt, E.R. Giardia assemblage A infection and diarrhea in Bangladesh. J. Infect. Dis., 2005, 192(12), 2171-2173. doi: 10.1086/498169 PMID: 16288384</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Corrêa, C.R.T.; Oliveira-Arbex, A.P.; David, É.B.; Guimarães, S. Genetic analysis of Giardia duodenalis isolates from children of low-income families living in an economically successful region in Southeastern Brazil. Rev. Inst. Med. Trop. São Paulo, 2020, 62, e20. doi: 10.1590/s1678-9946202062020 PMID: 32236387</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Messa, A., Jr; Köster, P.C.; Garrine, M.; Gilchrist, C.; Bartelt, L.A.; Nhampossa, T.; Massora, S.; Kotloff, K.; Levine, M.M.; Alonso, P.L.; Carmena, D.; Mandomando, I. Molecular diversity of Giardia duodenalis in children under 5 years from the Manhiça district, Southern Mozambique enrolled in a matched case-control study on the aetiology of diarrhoea. PLoS Negl. Trop. Dis., 2021, 15(1), e0008987. doi: 10.1371/journal.pntd.0008987 PMID: 33465074</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>Ponce-Macotela, M.; Martínez-Gordillo, M.N.; Bermúdez-Cruz, R.M.; Salazar-Schettino, P.M.; Ortega-Pierres, G.; Ey, P.L. Unusual prevalence of the Giardia intestinalis A-II subtype amongst isolates from humans and domestic animals in Mexico. Int. J. Parasitol., 2002, 32(9), 1201-1202. doi: 10.1016/S0020-7519(02)00086-3 PMID: 12117503</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Cedillo-Rivera, R.; Darby, J.M.; Enciso-Moreno, J.A.; Ortega-Pierres, G.; Ey, P.L. Genetic homogeneity of axenic isolates of Giardia intestinalis derived from acute and chronically infected individuals in Mexico. Parasitol. Res., 2003, 90(2), 119-123. doi: 10.1007/s00436-002-0807-0 PMID: 12756545</mixed-citation></ref></ref-list></back></article>
