ADAPTATION TO HIGH ALTITUDE IN THE CAUCASUS: TESTING THE HYPOTHESIS OF CONVERGENT EVOLUTION USING THE EGLN1 AND SPRTN GENES



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Abstract

BACKGROUND: Despite compelling evidence of convergent evolution in the EGLN1 and SPRTN genes in indigenous populations of the Andes and Tibet, the role of these adaptive variants in inhabitants of other high-altitude regions, particularly the Caucasus, remains unexplored. This study will determine whether the identified genetic pattern is universal or whether Caucasian populations exhibit unique pathways of genetic adaptation to high altitudes.

AIM: To identify differences in the distribution of allele and genotype frequencies of genetic variants rs479200 of the EGLN1 gene and rs2437150 of the SPRTN gene between the highland population of Balkars and the population of Kabardians inhabiting the plains and foothills of the Central Caucasus to assess the contribution of these variants to the formation of adaptive traits to hypoxia.

METHODS: Samples of Balkars (N=132) and Kabardins (N=131) were formed from representatives of these ethnic groups living in the highland and lowland zones of the Kabardino-Balkarian Republic, respectively. For genotyping, the technology for determining single nucleotide polymorphisms using the KASP method was used.

RESULTS: Population genetic analysis revealed significant differences in the distribution of genotypes and alleles of the EGLN1 and SPRTN hypoxia genes between Balkars and Kabardians. In the Balkar population, signs of selection were detected, including increased heterozygosity for the rs479200 locus of the EGLN1 gene and a higher frequency of the adaptive allele rs2437150 of the SPRTN gene. These differences likely reflect local adaptation to high-altitude conditions, despite the overall genetic similarity of the Caucasus populations.

CONCLUSION: A study of the role of the EGLN1 and SPRTN genes in the Balkars' adaptation to high altitude revealed a complex picture: the EGLN1 gene exhibits a unique, balanced selection favoring heterozygotes, while the SPRTN gene exhibits universal, positive selection. This demonstrates a combination of unique and universal evolutionary pathways for adaptation to hypobaric hypoxia.

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About the authors

Murat A. Dzhaubermezov

Ufa University of Science and Technology; Institute of Biochemistry and Genetics, Ufa Federal Research Center of the Russian Academy of Sciences

Author for correspondence.
Email: murat-kbr@mail.ru
ORCID iD: 0000-0003-1570-3174
SPIN-code: 1066-3369
Russian Federation

Gulnara A. Akhmadullina

Ufa University of Science and Technology

Email: ahmadullina2002@mail.ru

Natalia V. Ekomasova

Ufa University of Science and Technology; Institute of Biochemistry and Genetics, Ufa Federal Research Center of the Russian Academy of Sciences

Email: trofimova_nata_@mail.ru
ORCID iD: 0000-0003-3996-5734
SPIN-code: 6528-4117

Cand. Sci. (Biology)

Russian Federation, Ufa; Ufa

Liliya R. Gabidullina

Ufa University of Science and Technology

Email: liliya.gab@gmail.com
ORCID iD: 0009-0007-1575-2642
SPIN-code: 2799-0206
Russian Federation, Ufa

Zemfira R. Sufyanova

Ufa University of Science and Technology

Email: zemfira.sufyanova@mail.ru
ORCID iD: 0000-0001-5416-2214
SPIN-code: 5287-5381

Alfiya K. Nurgalieva

Ufa University of Science and Technology

Email: alfiyakh83@gmail.com
ORCID iD: 0000-0001-6077-9237
SPIN-code: 9658-8010

Cand. Sci. (Biology)

Russian Federation, Ufa

Yuliya Y. Fedorova

Ufa University of Science and Technology

Email: fedorova-y@yandex.ru
ORCID iD: 0000-0002-9344-828X
SPIN-code: 5497-0441

Cand. Sci. (Biology)

Russian Federation, Ufa

Darya S. Prokofyeva

Ufa University of Science and Technology

Email: dager-glaid@yandex.ru
ORCID iD: 0000-0003-0229-3188
SPIN-code: 7918-4737
Scopus Author ID: 57207892550

Cand. Sci. (Biology)

Russian Federation, Ufa

Elza K. Khusnutdinovna

Ufa University of Science and Technology; Institute of Biochemistry and Genetics, Ufa Federal Research Center of the Russian Academy of Sciences

Email: elzakh@mail.ru
ORCID iD: 0000-0003-2987-3334
SPIN-code: 7408-9797
ResearcherId: A-4810-2013

Dr. Sci. (Biology)

Russian Federation, Ufa; Ufa

References

  1. Leon-Velarde F, Richalet JP. Respiratory control in residents at high altitude: physiology and pathophysiology. High Alt Med Biol. 2006;7(2):125-137. doi: 10.1089/ham.2006.7.125.
  2. Richalet JP, Hermand E, Lhuissier FJ Cardiovascular physiology and pathophysiology at high altitude. Nat Rev Cardiol. 2024;21(2):75-88. doi: 10.1038/s41569-023-00924-9.
  3. Alekseev V.P. Essays on Human Ecology. Moscow: Nauka, 1993. (In Russ.)
  4. Beall CM. Tibetan and Andean patterns of adaptation to highaltitude hypoxia. Hum Biol. 2000;72(1):201-228
  5. Peng Y, Cui C, He Y. et al. Down-Regulation of EPAS1 Transcription and Genetic Adaptation of Tibetans to High-Altitude Hypoxia. Mol Biol Evol. 2017;34(4):818-830. doi: 10.1093/molbev/msw280
  6. Heinrich EC, Wu L, Lawrence ES. Genetic variants at the EGLN1 locus associated with high-altitude adaptation in Tibetans are absent or found at low frequency in highland Andeans. Ann Hum Genet. 2019;83(3):171-176. doi: 10.1111/ahg.12299
  7. Brutsaert TD, Kiyamu M, Elias Revollendo G, et al. Association of EGLN1 gene with high aerobic capacity of Peruvian Quechua at high altitude. PNAS. 2019;116(48):24006-24011. doi: 10.1073/pnas.1906171116
  8. Mallet RT, Burtscher J, Pialoux V, Pasha Q, Ahmad Y, Millet GP, Burtscher M Molecular Mechanisms of High-Altitude Acclimatization. Int J Mol Sci. 2023;24(2):1698. https:// doi: 10.3390/ijms24021698
  9. Dzhaubermezov MA, Ekomasova NV, Mustafin RN, Chagarov OS, Fedorova YY, Gabidullina LR, Nurgalieva AK, Prokofyeva DS, Khusnutdinovna EK Populations of the Caucasus as an object for studying the process of adaptation to conditions of high-altitude hypoxia. Ecological genetics. 2024;22(3):277-292. https://doi: 10.17816/ecogen630869
  10. Online Mendelian Inheritance in Man, OMIM®. McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University (Baltimore, MD), 04.12.2025. World Wide Web URL: https://omim.org/).
  11. Fong GH, Takeda K. Role and regulation of prolyl hydroxylase domain proteins. Cell Death Differ. 2008;15(4):635–41. 10.1038/cdd.2008.10. 10.1038/cdd.2008.10
  12. Wang GL, Jiang BH, Rue EA, Semenza GL. Hypoxia-inducible factor 1 is a basic-helixloop-helix-PAS heterodimer regulated by cellular O2 tension. PNAS. 1995;92:5510–4. 10.1073/pnas.92.12.5510
  13. Tang J, Deng H, Wang Z, et al. EGLN1 prolyl hydroxylation of hypoxia-induced transcription factor HIF1α is repressed by SET7-catalyzed lysine methylation. J Biol Chem. 2022;298(6):101961. 10.1016/j.jbc.2022.101961. 10.1016/j.jbc.2022.101961
  14. Aragonés J, Fraisl P, Baes M, Carmeliet P. Oxygen sensors at the crossroad of metabolism. Cell Metab. 2009;9(1):11–22. 10.1016/j.cmet.2008.10.001. 10.1016/j.cmet.2008.10.001
  15. 8 Aggarwal S, Negi S, Jha P, et al. EGLN1 involvement in high-altitude adaptation revealed through genetic analysis of extreme constitution types defined in Ayurveda. PNAS. 2010;107(44):18961-18966. doi: 10.1073/pnas.1006108107
  16. Sharma K, Mishra A, Singh HN, et al. High-altitude pulmonary edema is aggravated by risk loci and associated transcription factors in HIF-prolyl hydroxylases. Human Molecular Genetics. 2021;30(18):1734-1749. doi: 10.1093/hmg/ddab139
  17. Bigham A, Bauchet M, Pinto D, Mao X, Akey JM, Mei R, Scherer SW, Julian CG, Wilson MJ, López Herráez D, et al. Identifying signatures of natural selection in Tibetan and Andean populations using dense genome scan data. PLoS Genet. 2010;6(9):e1001116. doi: 10.1371/journal.pgen.1001116
  18. Zheng W, He Y, Guo Y, Yue T, Zhang H, Li J, Zhou B, Zeng X, Li L, Wang B, et al. Large-scale genome sequencing redefines the genetic footprints of high-altitude adaptation in Tibetans. Genome Biol. 2023;24(1):73. doi: 10.1186/s13059-023-02912-1
  19. Guo Z, Fan C, Li T, et al. Neural network correlates of high-altitude adaptive genetic variants in Tibetans: A pilot, exploratory study. Human Brain Mapping. 2020;41(9):2406-2430. doi: 10.1002/hbm.24954
  20. Pagani L, Ayub Q, MacArthur DG, Xue Y, Baillie JK, Chen Y, Kozarewa I, Turner DJ, Tofanelli S, Bulayeva K et al. High altitude adaptation in Daghestani populations from the Caucasus. Hum Genet. 2012;131(3):423-33. https://doi: 10.1007/s00439-011-1084-8
  21. Mathew 1985 - Mathew C. G. The isolation of high molecular weight eukaryotic DNA. Methods Mol. Biol. 1985;2:31-34.
  22. The 1000 Genomes Project Consortium. An integrated map of genetic variation from 1,092 human genomes. Nature. 2012;491(7422):56–65. doi: 10.1038/nature11632
  23. Yunusbayev B, Metspalu M, Järve M, Kutuev I, Rootsi S, Metspalu E, Behar DM, Varendi K, Sahakyan H, Khusainova R, Yepiskoposyan L, Khusnutdinova EK, Underhill PA, Kivisild T, Villems R. The Caucasus as an asymmetric semipermeable barrier to ancient human migrations. Mol Biol Evol. 2012;29(1):359-65. doi: 10.1093/molbev/msr221

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