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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Ecological genetics</journal-id><journal-title-group><journal-title xml:lang="en">Ecological genetics</journal-title><trans-title-group xml:lang="ru"><trans-title>Экологическая генетика</trans-title></trans-title-group></journal-title-group><issn publication-format="print">1811-0932</issn><issn publication-format="electronic">2411-9202</issn><publisher><publisher-name xml:lang="en">Eco-Vector</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">5542</article-id><article-id pub-id-type="doi">10.17816/ecogen6342-50</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Articles</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Статьи</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Influence of mutations in regulatory PHO genes on stability of a genetic material of yeast Saccharomyces cerevisiae</article-title><trans-title-group xml:lang="ru"><trans-title>ВЛИЯНИЕ МУТАЦИЙ В РЕГУЛЯТОРНЫХ ГЕНАХ РНО НА СТАБИЛЬНОСТЬ ГЕНЕТИЧЕСКОГО МАТЕРИАЛА ДРОЖЖЕЙ SACCHAROMYCES CEREVISIAE</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Smirnov</surname><given-names>Arseny M</given-names></name><name xml:lang="ru"><surname>Смирнов</surname><given-names>Арсений Михайлович</given-names></name></name-alternatives><email>nusense@mail.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Sambuk</surname><given-names>Elena V</given-names></name><name xml:lang="ru"><surname>Самбук</surname><given-names>Елена Викторовна</given-names></name></name-alternatives><email>esambuk@mail.ru</email><xref ref-type="aff" rid="aff2"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Saint Petersburg State University, Saint-Petersburg, RF</institution></aff><aff><institution xml:lang="ru">Санкт-Петербургский государственный университет, Санкт-Петербург, РФ</institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="en">Saint-Petersburg State University, Saint-Petersburg, RF</institution></aff><aff><institution xml:lang="ru">Санкт-Петербургский государственный университет, Санкт-Петербург, РФ</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2008-09-15" publication-format="electronic"><day>15</day><month>09</month><year>2008</year></pub-date><volume>6</volume><issue>3</issue><issue-title xml:lang="en">VOL 6, NO3 (2008)</issue-title><issue-title xml:lang="ru">ТОМ 6, №3 (2008)</issue-title><fpage>42</fpage><lpage>50</lpage><history><date date-type="received" iso-8601-date="2016-11-14"><day>14</day><month>11</month><year>2016</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2008, Smirnov A.M., Sambuk E.V.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2008, Смирнов А.М., Самбук Е.В.</copyright-statement><copyright-year>2008</copyright-year><copyright-holder xml:lang="en">Smirnov A.M., Sambuk E.V.</copyright-holder><copyright-holder xml:lang="ru">Смирнов А.М., Самбук Е.В.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">http://creativecommons.org/licenses/by/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://journals.eco-vector.com/ecolgenet/article/view/5542">https://journals.eco-vector.com/ecolgenet/article/view/5542</self-uri><abstract xml:lang="en"><p>Yeast Saccharomyces cerevisiae is convenient modelling object for studying of spontaneous mutations frequency under the influence of various environmental factors, and also as a result of metabolism infringement. One of necessary components of the growing media is inorganic phosphate. Its lack influences an expression of many genes. The system of genes expression regulation by phosphate is studied in detail. In the present work dependence of stability of a genetic material of a cage on its metabolic condition caused by mutations in genes, coding phosphate metabolism regulating proteins, is shown.</p></abstract><trans-abstract xml:lang="ru"><p>Дрожжи Saccharomyces cerevisiae являются удобным модельным объектом для изучения частоты возникновения спонтанных мутаций под воздействием различных факторов окружающей среды, а также в результате нарушения метаболизма. Одним из необходимых компонентов культуральной среды является неорганический фосфат. Его недостаток влияет на экспрессию многих генов. Система регуляции экспрессии генов фосфатом изучена подробно. В настоящей работе продемонстрирована зависимость стабильности генетического материала клетки от ее метаболического состояния, вызванного мутациями в генах, кодирующих регуляторные белки обмена фосфора.</p></trans-abstract><kwd-group xml:lang="en"><kwd>Saccharomyces cerevisiae</kwd><kwd>PHO85P</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>МУТАБИЛЬНОСТЬ</kwd><kwd>ЧУВСТВИТЕЛЬНОСТЬ К МУТАГЕНАМ</kwd></kwd-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Попова Ю.Г., 2002. Исследование роли протеин-киназы Pho85p в регуляции метаболизма дрожжей Saccharomyces cerevisiae и Pichia pastoris: Автореф. канд. дис. СПб, 155 с.</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Самбук Е. В., Попова Ю. Г., Физикова А. Ю. и др., 2003. Генетический анализ плейотропных эффектов мутаций рпо85 у дрожжей Saccharomyces cerevisiae//Генетика. Т. 39, № 8. С. 1039-1045.</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>Самбук Е. В., Физикова А. Ю., Захарова К. В. и др., 2005. Отсутствие циклинзависимой фосфопро-теинкинвазы Pho85p приводит к нарушению распределения митохондриальных нуклеоидов у дрожжей Saccharomyces cerevisiae//Цитология. Т. 47, № 10. С. 917-924.</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>Achilli A., Matmati N., Casalone E. et al., 2004. The exceptionally high rate of spontaneous mutations in the polymerase delta proofreading exonuclease-deficient Saccharomyces cerevisiae strain starved for adenine//BMC Genetics. Vol. 5. P. 34.</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Babudri N., Pavlov Y.I., Matmati N. et al., 2001. Stationary-phase mutations in proofreading exo-nuclease-deficient strains of the yeast Saccharomyces cerevisiae//Mol. Genet. Genomics. Vol.265. P. 362-366.</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Barbaric S.,Münsterkötter M., Coding С. et al., 1998. Cooperative Pho2-Pho4 interactions at the РП05 promoter are critical for binding of Pho4 to UASpl and for efficient transactivation by Pho4 at UASp2//Mol. Cell. Biol. Vol. 18, № 5. P. 2629-2639.</mixed-citation></ref><ref id="B7"><label>7.</label><mixed-citation>Begley T. J., Rosenbach A. S., Ideker T. et al., 2002. Damage recover pathways in Saccharomyces cerevisiae revealed by genomic phenotyping and interactome mapping//Molecular Cancer Research. Vol. 1. P. 103-112.</mixed-citation></ref><ref id="B8"><label>8.</label><mixed-citation>Brown С. J., Todd K.M., Rosenzweig R.F., 1998. Multiple duplications of yeast hexose transport genes in response to selection in a glucose-limited environment//Mol. Biol. Evol. Vol. 15. P. 931-942.</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Chen C., Umezu K., Kplodner R.D., 1998. Chromosomal rearragements occur in S. cerevisiae rial mutator mutants due to mutagenic lesions processed by double-strand-break repair//Mol. Cell. Vol. 2. P. 9-22.</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Eisler H., Frohlich К. U., Heidenreich E., 2004. Starvation for an essential amino acid induces apoptosis and oxidative stress in yeast//Exp Cell Res. Vol. 300. P. 345-353.</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>Fedorova I. V., Kovaltzova S. V., Gracheva E. M. et al., 2004. Requirement of HSM3 gene for spontaneous mutagenesis in Saccharomyces cerevisiae//Mutat Res. Vol. 554. P. 67-75.</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Galhardo R.S., Hastings P. J., Rosenberg S.M., 2007. Mutation as a stress response and the regulation of evolvability//Critical Reviews in Biochemistry and Molecular Biology. Vol. 42. P. 399-435.</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>Gasch A. P., Spellman P. Т., Као С. М. et al., 2000. Genomic expression programs in the response of yeast cells to environmental changes//Mol. Biol. Cell. Vol. 11. P. 4241-4257.</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>Hackett J. A., Feldser D.M., Greider С. W., 2001. Telomere dysfunction increases mutation rate and genomic instability//Cell. Vol. 106. P. 275-286.</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>Hall B. G., 1998. Adaptive mutagenesis: a process that generates almost exclusively beneficial mutations//Genetica.Vol. 102-103. P. 109-125.</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Hall B. G., 1992. Selection-induced mutations occur in yeast//PNAS. Vol. 89. P. 4300-4303.</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Hansche R.E., 1975. Gene duplication as a mechanism of genetic adaptation in Saccharomyces cerevisiae//Genetics. Vol. 79. P. 661-674.</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Hanway D., Chin J. K, Xia G et al., 2002. Previosly uncharacterized genes in UV-and MMS-induced DNA damage response in yeast//PNAS. Vol. 99. P. 10605-10610.</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Hryciw T., Tang M., Fontanie T. et al., 2002. MMSI protects against replication-dependent FNA damage in Saccharomyces cerevisiae//Mol. Genet. Genomics. Vol. 266. P. 848-857.</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Huang D., Farkas I., Roach P. J., 1996. Pho85p, a cyclin-dependent protein kinase, and Snf 1 p protein kinase act antagonistically to control glycogen accumulation in Saccharomyces cerevisiae//Mol. Cell. Biol. Vol. 16. P. 4357-4365.</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Huang D., Friesen H., Andrews В., 2007. Pho85, a multifunctional cyclin-dependent protein kinase in budding yeast//Molecular Microbiology. Vol. 66. P. 303-314.</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>Huang D., Patrick G., Moffat J. et al., 1999. Mammalian Cdk5 is a functional homologue of the budding yeast Pho85 cyclin-dependent protein kinase//PNAS. Vol. 96, N 25. P. 14445-14450.</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Hunter Т., Plowman G. D., 1997. The protein kinases of budding yeast: six score and more//Trends Bio-chem. Sci. Vol. 22. P. 18-22.</mixed-citation></ref><ref id="B24"><label>24.</label><mixed-citation>Ilyina V. L., Korogodin V. I., Fajszi C, 1986. Dependence of spontaneous reversion frequencies in haploid yeast of different yeast of different genotypes on the concentration of adenine in the medium and on the age of the culture//Mutation Res. Vol. 174.P. 189-194.</mixed-citation></ref><ref id="B25"><label>25.</label><mixed-citation>Kaffman A., Rank N.M., O'Shea E.K., 1998. Phosphorylation regulates association of the transcription factor Pho4 with its import receptor Pse/Kapl21//Genes Dev. Vol. 12. P. 2673-2683.</mixed-citation></ref><ref id="B26"><label>26.</label><mixed-citation>Kesti T., McDonald W. H, Yates J. R. et al., 2004. Cell cycle-dependent phosphorilation of the DNA polymerase epsilon subunit, Dpb2, by the Cdc28 cyclin-dependent protein kinase//J. Biol. Chem. Vol. 279. P. 14245-14255.</mixed-citation></ref><ref id="B27"><label>27.</label><mixed-citation>Kokoska R. J., Stefanovic L., DeMai J. et al., 2000. Increased rates of genomic deletions generated by mutations in the yeast gene encoding DNA polymerase delta or by decreases in the cellular levels of DNA polymerase delta//Mol. Cell. Biol. Vol. 20. P. 7490-7504.</mixed-citation></ref><ref id="B28"><label>28.</label><mixed-citation>Liu J., Kipreos E. Т., 2000. Evolution of cyclindepen-dent kinases (CDKs) and CDK-activating kinases (CAKs): differential conservation of CAKs in yeast and metazoan//Mol Biol Evol. Vol. 17. P. 1061-1074.</mixed-citation></ref><ref id="B29"><label>29.</label><mixed-citation>Liu C., Yang Z., Yang J., Xia Z., Ao S., 2000. Regulation of the yeast transcriptional factor PH02 activity by phosphorylation//J. Biol. Chem. Vol. 275. P. 31972-31978.</mixed-citation></ref><ref id="B30"><label>30.</label><mixed-citation>Measday V., Moore L., Retnakaran R. et al., 1997. A Family of cyclin-like proteins that interact with the Pho85 Cyclin-Depedent Kinase//Mol. and Cel. Biol. P. 1212-1223.</mixed-citation></ref><ref id="B31"><label>31.</label><mixed-citation>Nurse P.M., 2002. Cyclin Dependent kinases and cell cycle control//Bioscience Reports. Vol. 22. Nos. 5, 6.</mixed-citation></ref><ref id="B32"><label>32.</label><mixed-citation>0gawa N., DeRisi J., Brown P. O., 2000. New components of a system for phosphate accumulation and polyphosphate metabolism in revealed by genomic expression analysis//Mol. Biol. Cell. Vol. 11, N 12. P. 4309-4321.</mixed-citation></ref><ref id="B33"><label>33.</label><mixed-citation>0shima Y., 1997. The phosphatase system in Saccharomyces cerevisiae//Genes. Genet. Syst. Vol. 72. P. 323-334.</mixed-citation></ref><ref id="B34"><label>34.</label><mixed-citation>Putnam C. D., Pennaneach V., Kolodner R. D., 2005. Saccharomyces cerevisiae as a model system to define the chromosomal instability phenotype//Molecular and Cellular Biology. Vol. 25. N 16. P. 7226-7238.</mixed-citation></ref><ref id="B35"><label>35.</label><mixed-citation>Rocche W.A., Foster P. L., 2000. Determining mutation rates in bacterial populations//Methods. Vol. 20. P. 4-17.</mixed-citation></ref><ref id="B36"><label>36.</label><mixed-citation>Sambuk E. V., Popova J. G., Demberelijn O., Smirnov M. N., 1995. Genetic analysis of supressors of pho85 mutations in Saccharomyces cerevisiae//17th Int. Conf. on yeast genetics and molecular biology, Book of abstracts, Lisboa, Portugal p. 89.</mixed-citation></ref><ref id="B37"><label>37.</label><mixed-citation>Schneider K.R., Smith R.L., O'Shea E.K., 1994. Phosphate-regulated inactivation of the kinase PHO80-PHO85 by CDK inhibitor PH081//Science. Vol. 266. P. 122-126.</mixed-citation></ref><ref id="B38"><label>38.</label><mixed-citation>Siede W., Friedberg E. C., 1990. Influence of DNA repair deficiencies on the UV sensitivity of yeast cells in different cell cycle stages//Mutat. Res. Vol. 245. P. 287-292.</mixed-citation></ref><ref id="B39"><label>39.</label><mixed-citation>Timblin B.K, Bergman L.W., 1997. Elevated expression of stress response genes resulting from deletion of the PH085 gene//Mol. Microbiol. Vol. 26. P. 981-990.</mixed-citation></ref><ref id="B40"><label>40.</label><mixed-citation>Toh-e A., Nishizawa M., 2001. Structure and function of cyclin-dependent Pho85p kinase of Saccharomyces cerevisiae//J. Gen. Appl. Microbiol. Vol. 47. P. 107-117.</mixed-citation></ref><ref id="B41"><label>41.</label><mixed-citation>Toh-e A., TanakaK, Uesono Y. et al., 1988. PH085, a negative regulator of the PHO system, is a homolog of the protein kinase gene, CDC28, of Saccharomyces cerevisiae//Mol. Gen. Genet. Vol. 214. P. 162-164.</mixed-citation></ref><ref id="B42"><label>42.</label><mixed-citation>Wu X., Wang Z., 1998. Relationships between yeast Rad27 and Apnl in response to apurinic/apyrimidin-ic (AP) sites in DNA//Nucleic Acids Res. Vol. 27. P. 956-962.</mixed-citation></ref></ref-list></back></article>
