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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="other" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Ecological genetics</journal-id><journal-title-group><journal-title xml:lang="en">Ecological genetics</journal-title><trans-title-group xml:lang="ru"><trans-title>Экологическая генетика</trans-title></trans-title-group></journal-title-group><issn publication-format="print">1811-0932</issn><issn publication-format="electronic">2411-9202</issn><publisher><publisher-name xml:lang="en">Eco-Vector</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">695654</article-id><article-id pub-id-type="doi">10.17816/ecogen695654</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Human ecological genetics</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Экологическая генетика человека</subject></subj-group><subj-group subj-group-type="article-type"><subject></subject></subj-group></article-categories><title-group><article-title xml:lang="en">Cystinuria in Clinical Practice: Challenges in Genetic Verification and Laboratory Diagnosis</article-title><trans-title-group xml:lang="ru"><trans-title/></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-7825-273X</contrib-id><contrib-id contrib-id-type="spin">6019-1547</contrib-id><name-alternatives><name xml:lang="en"><surname>Sopova</surname><given-names>Julia V.</given-names></name><name xml:lang="ru"><surname>Сопова</surname><given-names>Юлия Викторовна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>PhD, Leading Researcher, Center for transgenesis and genome editing</p></bio><email>sopova@hotmail.com</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0009-0005-1124-3360</contrib-id><contrib-id contrib-id-type="spin">1019-8610</contrib-id><name-alternatives><name xml:lang="en"><surname>Luganskaya</surname><given-names>Polina S.</given-names></name><name xml:lang="ru"><surname>Луганская</surname><given-names>Полина Сергеевна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Junior Researcher, Center for transgenesis and genome editing</p></bio><email>polina.luganskaja@yandex.ru</email><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0009-0007-4108-6161</contrib-id><contrib-id contrib-id-type="spin">7921-4448</contrib-id><name-alternatives><name xml:lang="en"><surname>Kandina</surname><given-names>Daria A.</given-names></name><name xml:lang="ru"><surname>Кандина</surname><given-names>Дарья Алексеевна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>research engineer, Center for transgenesis and genome editing</p></bio><email>candyda20@mail.ru</email><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0009-0008-8920-6705</contrib-id><contrib-id contrib-id-type="spin">5952-4539</contrib-id><name-alternatives><name xml:lang="en"><surname>Akhmarov</surname><given-names>Ilyas I.</given-names></name><name xml:lang="ru"><surname>Ахмаров</surname><given-names>Ильяс Идрисович</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>research assistant, Center for transgenesis and genome editing</p></bio><email>luvk7411@yandex.ru</email><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0009-0004-3400-6678</contrib-id><contrib-id contrib-id-type="spin">7459-9945</contrib-id><name-alternatives><name xml:lang="en"><surname>Kirillov</surname><given-names>Oleg A.</given-names></name><name xml:lang="ru"><surname>Кириллов</surname><given-names>Олег Андреевич</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>research assistant, Center for transgenesis and genome editing</p></bio><email>o-kirillov03@mail.ru</email><xref ref-type="aff" rid="aff3"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-0236-3302</contrib-id><contrib-id contrib-id-type="spin">2573-1759</contrib-id><name-alternatives><name xml:lang="en"><surname>Leonova</surname><given-names>Elena I.</given-names></name><name xml:lang="ru"><surname>Леонова</surname><given-names>Елена Ивановна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>PhD in biology, Head, Center for transgenesis and genome editing</p></bio><email>1102.elena@gmail.com</email><xref ref-type="aff" rid="aff2"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Saint-Peterburg State University</institution></aff><aff><institution xml:lang="ru"></institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="en">Saint-Petersburg State University</institution></aff><aff><institution xml:lang="ru"></institution></aff></aff-alternatives><aff-alternatives id="aff3"><aff><institution xml:lang="en">Saint-Petersburg State University</institution></aff><aff><institution xml:lang="ru">198504 Russia Saint-Petersburg Botanicheskaya str, 17</institution></aff></aff-alternatives><pub-date date-type="preprint" iso-8601-date="2026-04-01" publication-format="electronic"><day>01</day><month>04</month><year>2026</year></pub-date><volume>24</volume><issue>2</issue><issue-title xml:lang="ru"/><history><date date-type="received" iso-8601-date="2025-10-31"><day>31</day><month>10</month><year>2025</year></date><date date-type="accepted" iso-8601-date="2026-03-29"><day>29</day><month>03</month><year>2026</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; , Eco-Vector</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; , Эко-Вектор</copyright-statement><copyright-holder xml:lang="en">Eco-Vector</copyright-holder><copyright-holder xml:lang="ru">Эко-Вектор</copyright-holder><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://eco-vector.com/for_authors.php#07</ali:license_ref></license></permissions><self-uri xlink:href="https://journals.eco-vector.com/ecolgenet/article/view/695654">https://journals.eco-vector.com/ecolgenet/article/view/695654</self-uri><abstract xml:lang="en"><p>Cystinuria is an inherited disorder caused by impaired reabsorption of cystine and dibasic amino acids - ornithine, lysine, arginine - in the proximal renal tubules. The genetic basis of cystinuria involves mutations in the <italic>SLC3A1</italic> gene (encoding the heavy subunit of the rBAT transporter) and the <italic>SLC7A9</italic> gene (encoding the light subunit b<sup>0,+</sup>AT). Dysfunction of the rBAT-b<sup>0,+</sup>AT transporter leads to excessive cystine excretion, which has low solubility at physiological urine pH, promoting the formation of calculi. The inheritance pattern of cystinuria varies: mutations in <italic>SLC3A1</italic> typically follow an autosomal recessive mode, whereas mutations in <italic>SLC7A9</italic> exhibit a broader spectrum, ranging from recessive to dominant inheritance. Notably, approximately 10% of patients lack detectable mutations in these genes, suggesting the potential involvement of non-coding regulatory regions or modifier genes. This review synthesizes current understanding of renal cystine transport and explores complex clinical cases that deviate from the classical autosomal recessive model associated with <italic>SLC3A1</italic> mutations.</p></abstract><trans-abstract xml:lang="ru"><p/></trans-abstract><kwd-group xml:lang="en"><kwd>slc3a1, slc7a9, cystinuria, amino acid transporter, inherited kidney diseases</kwd></kwd-group><funding-group><award-group><funding-source><institution-wrap><institution xml:lang="en">Saint-Petersburg State University</institution></institution-wrap></funding-source><award-id>129658320</award-id></award-group></funding-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Scriver CR. Garrod’s Croonian Lectures (1908) and the charter ‘Inborn Errors of Metabolism’: Albinism, alkaptonuria, cystinuria, and pentosuria at age 100 in 2008. 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