ANALYSIS OF A GENETIC DIVERSITY OF KEMEROVO VIRUS AND ITS PHYLOGENETIC RELATIONSHIPS TO THE GREAT ISLAND VIRUS GROUP


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Abstract

Kemerovo virus is an arbovirus belonging to the genus Orbivirus of the fam ily Reoviridae. It is able to cause a human disease with symptoms of meningoencephalitis. There are scarce current data on the genetic diversity of Kemerovo virus, its basic epidemiological characteristics, and its contribution to the pattern of tick-borne infections. To study the genetic diversity of the virus and its relationship to related viruses, representative members of the Great Island virus group, the investigators carried out genome sequencing of 10 Kemerovo virus strains isolated from different sources in the Russian Federation in 1962 to 1975 and a phylogenetic analysis of the obtained nucleotide sequences. The percent nucleotide identity of the representatives of the Great Island virus group was determined by the segment encoding the sequence of the protein VF3. Based on the findings, the authors discuss the genetic relationship of Great Island viruses and the possible ways of their distribution.

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About the authors

Marina V. Safonova

Central Research Institute of Epidemiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: marina-iris@mail.ru
Researcher, Central Research Institute of Epidemiology 3a, Novogireevskaya St., Moscow 111123, Russia

Vladimir G. Dedkov

Pasteur Saint Petersburg Research Institute of Epidemiology and Microbiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: vdedkov@cmd.su
Cand. Med. Sсi., Deputy Director for Research Saint Petersburg, Russia

Anatoly P. Gmyl

I.M. Sechenov First Moscow State Medical University (Sechenov University), Ministry of Health of Russia; M.P. Chumakov Federal Research Center for Study and Design of Immunobiological Preparations, Russian Academy of Sciences

Cand. Biol. Sсi., Associate Professor, Department of Organization and Technology of Immunobiological Preparations; Head, Laboratory of Biochemistry Moscow, Russia

Galina G. Karganova

M.P. Chumakov Federal Research Center for Study and Design of Immunobiological Preparations, Russian Academy of Sciences; M.V. Fomonosov Moscow State University

Email: karganova@bk.ru
Prof. BD, Head, Laboratory of Arboviruses; Professor, Department of Virology, Faculty of Biology Moscow, Russia

Anna S. Speranskaya

Central Research Institute of Epidemiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: anna.speranskaya@pcr.ms
Cand. Biol. Sсi., Researcher Moscow, Russia

Alexey D. Neverov

Central Research Institute of Epidemiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: neva@cmd.su
Cand. Biol. Sсi., Head, Group of Bioinformatics Moscow, Russia

Gennady G. Fedonln

Central Research Institute of Epidemiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: gennady.fedonin@gmail.com
Cand. Phys. Mat. Sсi., Bioinformatic Programmer Moscow, Russia

Anna V. Valdokhina

Central Research Institute of Epidemiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: tsybina.katja@gmail.com
Junior Researcher, Central Research Institute of Epidemiology Moscow, Russia

Ekaterina V. Pimkina

Central Research Institute of Epidemiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: anna_valdokhina@yandex.ru
Junior Researcher Moscow, Russia

Kamil F. Khaflsov

Central Research Institute of Epidemiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: khafizov@cmd.su
Cand. Med. Sсi., Research Group for Development of New Diagnostic Methods Based on Next -Generation Sequencing Technology Moscow, Russia

Evgeniya N. Samokhina

Central Research Institute of Epidemiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: Yumi@cmd.su
Researcher Moscow, Russia

German A. Shipulin

Central Research Institute of Epidemiology, Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being

Email: german@pcr.ru
Cand. Med. Sсi., Head, Department of Molecular Diagnostic and Epidemiology Moscow, Russia

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