SITE-directed mutagenesis for producing grain sorgum mutants with improved kafirine digestibility

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The use of genome editing technologies opens wide opportunities for the targeted mutagenesis in important agricultural crops. In the context of global warming, sorghum, an important drought- and heat-tolerant crop is of particular importance. However, compared to other cereals, sorghum grain has a lower nutritional value, due to the resistance of its storage proteins (kafirins) to proteolytic digestion. A decrease in the synthesis of kafirins as a result of mutations or the expression of the RNAi genetic constructs modifies the ultrastructure of protein bodies and improves their digestibility by proteases. To obtain mutants with improved protein digestibility, we created four binary vectors for site-directed mutagenesis of the k1C5 and gKAF1 genes encoding α- and γ-kafirin, respectively. Each of these vectors contained the cas9 endonuclease gene and a guide RNA targeted the nucleotide sequences encoding the kafirin signal polypeptides. By means of agrobacterial transformation, the created vectors were introduced into the genome of the grain sorghum cv. Avans. 14 transgenic plants were regenerated. Sequencing of 5 regenerants obtained using a vector for the k1C5 mutagenesis revealed 3 plants with mutations. The offspring of these mutants had a higher digestibility of grain proteins in vitro (86–92%) compared to the initial cv. Avans (63–67%). Notably, the T1 plants lacked the cas9 gene and the bar marker gene, which indicates the production of mutants with the edited k1C5 gene sequence, which lack the genetic construct that induced this mutation. Two mutants with mutations in the gKAF1 sequence were obtained. Thus, using the CRISPR/Cas technology, we have obtained mutants with improved digestibility of kafirins, which can be used in practical sorghum breeding.

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The use of genome editing technologies opens wide opportunities for the targeted mutagenesis in important agricultural crops. In the context of global warming, sorghum, an important drought- and heat-tolerant crop is of particular importance. However, compared to other cereals, sorghum grain has a lower nutritional value, due to the resistance of its storage proteins (kafirins) to proteolytic digestion. A decrease in the synthesis of kafirins as a result of mutations or the expression of the RNAi genetic constructs modifies the ultrastructure of protein bodies and improves their digestibility by proteases. To obtain mutants with improved protein digestibility, we created four binary vectors for site-directed mutagenesis of the k1C5 and gKAF1 genes encoding α- and γ-kafirin, respectively. Each of these vectors contained the cas9 endonuclease gene and a guide RNA targeted the nucleotide sequences encoding the kafirin signal polypeptides. By means of agrobacterial transformation, the created vectors were introduced into the genome of the grain sorghum cv. Avans. 14 transgenic plants were regenerated. Sequencing of 5 regenerants obtained using a vector for the k1C5 mutagenesis revealed 3 plants with mutations. The offspring of these mutants had a higher digestibility of grain proteins in vitro (86–92%) compared to the initial cv. Avans (63–67%). Notably, the T1 plants lacked the cas9 gene and the bar marker gene, which indicates the production of mutants with the edited k1C5 gene sequence, which lack the genetic construct that induced this mutation. Two mutants with mutations in the gKAF1 sequence were obtained. Thus, using the CRISPR/Cas technology, we have obtained mutants with improved digestibility of kafirins, which can be used in practical sorghum breeding.

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Об авторах

Lev Elkonin

Federal Centre of Agriculture Research of South-East Region

Email: lelkonin@gmail.com
ORCID iD: 0000-0003-3806-5697

Dr. Sci. (Biol.), Chief Researcher

Россия, Saratov

Grigoryi Gerashchenkov

Institute of Biochemistry and Genetics — Subdivision of the Ufa Federal Research Centre of the Russian Academy of Sciences

Email: apomixis@anrb.ru
ORCID iD: 0000-0003-1042-8273
SPIN-код: 3373-1045

Cand. Sci (Biol.), Senior Researcher

Россия, Ufa

Natalie Borisenko

Federal Centre of Agriculture Research of South-East Region

Email: borisencko-n.v@yandex.ru
ORCID iD: 0000-0003-3543-9083

Junior Researcher

Россия, Saratov

Odissey Kenzhegulov

Federal Centre of Agriculture Research of South-East Region

Email: odissey94.sid@mail.ru
ORCID iD: 0000-0002-1272-3105

Junior Researcher

Россия, Saratov

Saule Sarsenova

Federal Centre of Agriculture Research of South-East Region

Email: saulesarsenowa@mail.ru
ORCID iD: 0009-0007-2471-1631
Россия, Saratov

Valery Panin

Federal Centre of Agriculture Research of South-East Region

Email: panin-vm@yandex.ru
ORCID iD: 0009-0007-2851-415X
SPIN-код: 4049-8627

Cand. Sci (Biol.), Leading Researcher

Россия, Saratov

Natalia Rozhnova

Institute of Biochemistry and Genetics — Subdivision of the Ufa Federal Research Centre of the Russian Academy of Sciences

Автор, ответственный за переписку.
Email: nata2013@gmail.com
ORCID iD: 0000-0001-5556-7993
SPIN-код: 5425-2635

Cand. Sci (Biol.), Senior Researcher

Россия, Ufa

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