Polymorphism of the cytochrome P450 CYP1A1 (Ile462Val) gene in the populations of Balkars and Karachays
- Authors: Dzhaubermezov M.A.1,2, Mingazheva E.T.1,2, Axberg D.S.1, Ekomasova N.V.1,2, Khusnutdinova E.K.1,2
-
Affiliations:
- Bashkir State University
- Institute of Biochemistry and Genetics
- Issue: Vol 19, No 3 (2021)
- Pages: 273-279
- Section: Human ecological genetics
- URL: https://journals.eco-vector.com/ecolgenet/article/view/71456
- DOI: https://doi.org/10.17816/ecogen71456
- ID: 71456
Cite item
Abstract
BACKGRAUND: Cytochrome P450 is an enzyme involved in the metabolism of phase I xenobiotics, toxins, endogenous hormones and pharmaceuticals.
AIM: Is studying the polymorphism of the CYP1A1 gene (Ile462Val, rs1048943) in the Turkic-speaking populations of the central part of the North Caucasus Region (Balkars and Karachays).
MATERIALS AND METHODS: We analyzed DNA isolated from leukocytes of peripheral venous blood of a total of 177 unrelated Balkars and Karachays (104 Balkars, 73 Karachays).
RESULTS: The ethnicity of the studied individuals was established, indicating their ancestors up to the third generation. The method of genotyping was performed by real-time PCR using competing TaqMan probes. As a result: the frequency of the 462Val variant in the sample of Balkars was 8,6% (95% CI 5,21–13,33), slightly above the frequency range found in European populations. In the sample of Karachays, the frequency of the 462Val allele was 7,5% (95% CI 9,82–13.08), which is the upper limit of values typical for European populations.
CONCLUSION: In the Turkic-speaking populations of the central part of the North Caucasus, the CYP1A1 462Val allele occurs with a frequency characteristic of the Near Eastern and European populations.
Full Text
About the authors
Murat A. Dzhaubermezov
Bashkir State University; Institute of Biochemistry and Genetics
Email: murat-kbr@mail.ru
SPIN-code: 1066-3369
Cand. Sci. (Biol.)
Russian Federation, 450076, Republic of Bashkortostan, Ufa, st. Zaki Validi, 32; 450054, Republic of Bashkortostan, Ufa, Prospekt Oktyabrya, 71Elvira T. Mingazheva
Bashkir State University; Institute of Biochemistry and Genetics
Email: elvira.f91@mail.ru
Assistant
Russian Federation, 450076, Republic of Bashkortostan, Ufa, st. Zaki Validi, 32; 450054, Republic of Bashkortostan, Ufa, Prospekt Oktyabrya, 71Darya S. Axberg
Bashkir State University
Email: dasha_00_19@mail.ru
student
Russian Federation, 450076, Republic of Bashkortostan, Ufa, st. Zaki Validi, 32Natalya V. Ekomasova
Bashkir State University; Institute of Biochemistry and Genetics
Email: trofimova_nata_@mail.ru
SPIN-code: 6528-4117
Cand. Sci. (Biol.)
Russian Federation, 450076, Republic of Bashkortostan, Ufa, st. Zaki Validi, 32; 450054, Republic of Bashkortostan, Ufa, Prospekt Oktyabrya, 71Elsa K. Khusnutdinova
Bashkir State University; Institute of Biochemistry and Genetics
Author for correspondence.
Email: elzakh@mail.ru
SPIN-code: 7408-9797
Scopus Author ID: 35381528600
Dr. Sci. (Biol.)
Russian Federation, 450076, Republic of Bashkortostan, Ufa, st. Zaki Validi, 32; 450054, Republic of Bashkortostan, Ufa, Prospekt Oktyabrya, 71References
- Liu Y, Li X, Zhang B, et al. CYP1A1 methylation mediates the effect of smoking and occupational polycyclic aromatic hydrocarbons co-exposure on oxidative DNA damage among Chinese coke-oven workers. Environ Health. 2019;18:69. doi: 10.1186/s12940-019-0508-0
- Shimada T, Martin MV, Pruess-Schwartz D, et al. Roles of individual human cytochrome P-450 enzymes in the bioactivation of benzo(a)pyrene, 7,8-dihydroxy-7,8-dihydrobenzo(a)pyrene, and other dihydrodiol derivatives of polycyclic aromatic hydrocarbons. Cancer Res. 1989;49:6304–6312.
- Stohs SJ. Oxidative stress induced by 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). Free Radic Biol Med. 1990;9(1):79–90. doi: 10.1016/0891-5849(90)90052-K
- Zhang Z, Pelletier RD, Wong YN, et al. Preferential inducibility of CYP1A1 and CYP1A2 by TCDD: Differential regulation in primary human hepatocytes versus transformed human cells. Biochem Bioph Res Co. 2006;341(2):399–407. doi: 10.1016/j.bbrc.2005.12.203
- Zhou SF. Polymorphism of human cytochrome P450 2D6 and its clinical significance: Part I. Clin Pharmacokinet. 2009;48(11): 689–723. doi: 10.2165/11318030-000000000-00000
- Chiaro CR, Patel RD, Marcus CB, Perdew GH. Evidence for an aryl hydrocarbon receptor-mediated cytochrome p450 autoregulatory pathway. Mol Pharmacol. 2007;72(5):1369–1379. doi: 10.1124/mol.107.038968
- Nebert DW, Roe AL, Dieter MZ, et al. Role of the aromatic hydrocarbon receptor and [Ah] gene battery in the oxidative stress response, cell cycle control, and apoptosis. Biochem Pharmacol. 2000;59(1):65–85. doi: 10.1016/s0006-2952(99)00310-x
- Nakachi K, Imai K, Hayashi S, Kawajiri K. Polymorphisms of the CYP1A1 and glutathione S-transferase genes associated with susceptibility to lung cancer in relation to cigarette dose in a Japanese population. Cancer Res. 1993;53(13):2994–2999. doi: 10.1016/0169-5002(94)90751-X
- Chen J, Cheng M, Li Y, Jiang C. Relationship between CYP1A1 genetic polymorphisms and renal cancer in China. Asian Pac J Cancer Prev. 2011;12(9):2163–2166. doi: 10.3724/SP.J.1008.2008.00971
- The 1000 Genomes Project Consortium. An integrated map of genetic variation from 1,092 human genomes. Nature. 2012;491(7422):56–65. doi: 10.1038/nature11632
- Tiis RP, Osipova LP, Churkina TV, et al. The Ile462Val polymorphism of the cytochrome P450 CYP1A1 gene among Tundra Nenets in Yamalo-Nenets Autonomous Okrug, Nganasans in the Taimyr Peninsula and Russians in Siberia. Vavilov journal of genetics and breeding. 2016;20(1):16–22. (In Russ.) doi: 10.18699/VJ16.102
- Tabikhanova LE, Osipova LP, Churkina TV, et al. Genetic polymorphism of CYP1A1 and CYP2D6 in populations of Buryats, Teleuts and Russians of Eastern Siberia. Vavilov journal of genetics and breeding. 2018;22(2):205–211. (In Russ.) doi: 10.18699/VJ18.348
- Massabayeva M, Chaizhunusova N, Aukenov N, et al. Association of radiation risk in the second and third generations with polymorphisms in the genes CYP1A1, CYP2E1, GSTP1 and changes in the thyroid. Mol Med. 2019;25:48. doi: 10.1186/s10020-019-0117-y
- Korytina G, Kochetova O, Akhmadishina L, et al. Polymorphisms of Cytochrome P450 Genes in Three Ethnic Groups from Russia. Balkan Med J. 2012;29(3):252–260. doi: 10.5152/balkanmedj.2012.039
- Tiis RP, Osipova LP, Churkina TV, et al. The Ile462Val polymorphism of the cytochrome P450 CYP1A1 gene in the Tundra Nenets of the Yamalo-Nenets Autonomous Okrug, Nganasans of the Taimyr Peninsula, and Russians of Siberia. Russ J Genet: Appl Res. 2016;6(8):864–870. doi: 10.1134/S2079059716070133
- Elhawary NA, Nassir A, Saada H, et al. Combined Genetic Biomarkers Confer Susceptibility to Risk of Urothelial Bladder Carcinoma in a Saudi Population. Dis Markers. 2017;2017:1474560. doi: 10.1155/2017/1474560
- Sindi IA, Babalghith AO, Tayeb MT, et al. Risk of Colorectal Carcinoma May Predispose to the Genetic Variants of the GST, CYP450, and TP53 Genes Among Nonsmokers in the Saudi Community. Int J Gen Med. 2021;14:1311–1323. doi: 10.2147/IJGM.S294802
- Hoidy WH, Jaber FA, Al-Askiry MA. Association of CYP1A1 rs1048943 Polymorphism with Prostate Cancer in Iraqi Men Patients. Asian Pac J Cancer Prev. 2019;20(12):3839–3842. doi: 10.31557/APJCP.2019.20.12.3839
- Bulayeva K, Jorde LB, Ostler C, et al. Genetics and population history of Caucasus populations. Hum Biol. 2003;75(6):837–853. doi: 10.1353/hub.2004.0003
- Roostalu U, Kutuev I, Loogväli EL, et al. Origin and Expansion of Haplogroup H, the Dominant Human Mitochondrial DNA Lineage in West Eurasia: the Near Eastern and Caucasian Perspective. Mol Biol Evol. 2007;24(2):436–448. doi: 10.1093/molbev/msl173
- Kutuev IA, Khusnutdinova EhK. Geneticheskaya struktura i molekulyarnaya filogeografiya narodov Evrazii. Ufa, Gilem; 2011. 239 p. (In Russ.)
- Yunusbayev B, Metspalu M, Jarve M, et al. The Caucasus as an asymmetric semipermeable barrier to ancient human migrations. Mol Biol Evol. 2012;29(1):359–365. doi: 10.1093/molbev/msr221
- Khusnutdinova EK, Litvinov SS, Kutuev IA, et al. Genotoxic Effects of Tacrolimus on Human Lymphocyte Cells. Russian Journal of Genetics. 2012;48(6):750–761. (In Russ.) doi: 10.1134/S1022795412050134
- Dzhaubermezov MA, Ekomasova NV, Reidla M, et al. Genetic Characterization of Balkars and Karachays Using mtDNA Data. Russian Journal of Genetics. 2019;55(1):110–120. (In Russ.) doi: 10.1134/S0016675819010053
- Dzhaubermezov MA, Ekomasova NV, Litvinov SS, et al. Genetic characterization of Balkars and Karachays according to the variability of the Y chromosome. Russian Journal of Genetics. 2017;53(10):1224–1231. (In Russ.) doi: 10.7868/S0016675817100034
- Mathew CG. The isolation of high molecular weight eukaryotic DNA. Methods Mol Biol. 1984;2:31–34. doi: 10.1385/0-89603-064-4:31
- Skadrić I, Stojković O. Defining screening panel of functional variants of CYP1A1, CYP2C9, CYP2C19, CYP2D6, and CYP3A4 genes in Serbian population. Int J Legal Med. 2020;134(2):433–439. doi: 10.1007/s00414-019-02234-7
- Roszak A, Lianeri M, Sowińska A, Jagodziński PP. CYP1A1 Ile462Val Polymorphism as a Risk Factor in Cervical Cancer Development in the Polish Population. Mol Diagn Ther. 2014;18(4):445–450. doi: 10.1007/s40291-014-0095-2
- Khalili-Tanha G, Barzegar A, Nikbakhsh N, Ansari-Pirsaraei Z. Association of CYP1A1 M2 (A2455G) Polymorphism with Susceptibility to Breast Cancer in Mazandaran Province, Northern Iran: A Case-control Study. Int J Prev Med. 2019;10(1):92. doi: 10.4103/ijpvm.IJPVM_57_18