Effect of mutations in the Sym7, Sym19 and Sym34 genes on the interaction of pea (Pisum sativum L.) with the arbuscular mycorrhizal fungus Rhizophagus irregularis
- Authors: Shtark O.Y.1, Zhernakov A.I.1, Kichigina N.E.1, Akhtemova G.A.1, Sulima A.S.1, Zorin E.A.1, Zhukov V.A.1
-
Affiliations:
- All-Russia Research Institute for Agricultural Microbiology
- Issue: Vol 22, No 3 (2024)
- Pages: 225-242
- Section: Genetic basis of ecosystems evolution
- Submitted: 14.12.2023
- Accepted: 26.08.2024
- Published: 29.09.2024
- URL: https://journals.eco-vector.com/ecolgenet/article/view/624607
- DOI: https://doi.org/10.17816/ecogen624607
- ID: 624607
Cite item
Abstract
BACKGROUND: Within the pea (Pisum sativum L.) species, genotypes with high and low responsiveness to inoculation with arbuscular mycorrhizal fungi can be distinguished.
AIM: The aim of this study was to test the hypothesis that pea responsiveness to arbuscular mycorrhizal fungi inoculation may be inversely correlated with root colonization levels.
MATERIALS AND METHODS: The wild-type line Finale with low responsiveness to arbuscular mycorrhizal fungi inoculation and symbiotic mutants obtained on its basis were used. Plants were grown under controlled climatic conditions with a deficiency of available phosphorus; the fungus Rhizophagus irregularis was used for inoculation. Parameters of plant growth and development of reproductive organs were determined 52 and 71 days after inoculation, which corresponded to the flowering and pod filling stages, respectively.
RESULTS: All mutant lines under conditions without inoculation had generally reduced parameters compared to the original line Finale. Inoculation led to a decrease in many parameters in the line Finale. Mutations in the Sym7 and Sym34 genes, which led to a decrease or delay in the start of mycorrhization, respectively, contributed to the manifestation of a positive plant response to inoculation. The mutant in the Sym19 gene almost completely lacked intrartadical colonization, while inoculation had no effect on the growth and development of above-ground organs.
CONCLUSIONS: The study results support the idea that reducing mycorrhization levels can have a positive effect on pea plants.
Full Text

About the authors
Oksana Y. Shtark
All-Russia Research Institute for Agricultural Microbiology
Email: oshtark@yandex.ru
ORCID iD: 0000-0002-3656-4559
SPIN-code: 4934-4465
Scopus Author ID: 21935113900
ResearcherId: J-4063-2018
Cand. Sci. (Biology)
Russian Federation, Saint PetersburgAleksandr I. Zhernakov
All-Russia Research Institute for Agricultural Microbiology
Email: azhernakov@gmail.com
ORCID iD: 0000-0001-8961-9317
Russian Federation, Saint Petersburg
Natalia E. Kichigina
All-Russia Research Institute for Agricultural Microbiology
Email: n.kichigina@arriam.ru
ORCID iD: 0000-0002-6568-7988
Russian Federation, Saint Petersburg
Gulnara A. Akhtemova
All-Russia Research Institute for Agricultural Microbiology
Email: ahgulya@yandex.ru
ORCID iD: 0000-0001-7957-3693
SPIN-code: 1714-8554
Cand. Sci. (Biology)
Russian Federation, Saint PetersburgAnton S. Sulima
All-Russia Research Institute for Agricultural Microbiology
Email: asulima@arriam.ru
ORCID iD: 0000-0002-2300-857X
SPIN-code: 4906-1159
Cand. Sci. (Biology)
Russian Federation, Saint PetersburgEvgeny A. Zorin
All-Russia Research Institute for Agricultural Microbiology
Email: kjokkjok8@gmail.com
ORCID iD: 0000-0001-5666-3020
SPIN-code: 5048-0203
Cand. Sci. (Biology)
Russian Federation, Saint PetersburgVladimir A. Zhukov
All-Russia Research Institute for Agricultural Microbiology
Author for correspondence.
Email: vzhukov@arriam.ru
ORCID iD: 0000-0002-2411-9191
SPIN-code: 2610-3670
Scopus Author ID: 35325957900
Candidate of Biological Sciences, Head of the Laboratory of Genetics of Plant-Microbe Interactions
Russian Federation, Saint PetersburgReferences
- Smith SE, Read DJ. Mycorrhizal symbiosis. 3rd edition. San Diego, London: Academic Press; 2008. doi: 10.1016/B978-0-12-370526-6.X5001-6
- Keymer A., Gutjahr C. Cross-kingdom lipid transfer in arbuscular mycorrhiza symbiosis and beyond. Curr Opin Plant Biol. 2018;44: 137–144. doi: 10.1016/j.pbi.2018.04.005
- Salmeron-Santiago IA, Martínez-Trujillo M, Valdez-Alarcón JJ, et al. An updated review on the modulation of carbon partitioning and allocation in arbuscular mycorrhizal plants. Microorganisms. 2022;10(1):75. doi: 10.3390/microorganisms10010075
- Nadal M, Paszkowski U. Polyphony in the rhizosphere: presymbiotic communication in arbuscular mycorrhizal symbiosis. Curr Opin Plant Biol. 2013;16(4):473–479. doi: 10.1016/j.pbi.2013.06.005
- Luginbuehl LH, Oldroyd GED. Understanding the arbuscule at the heart of endomycorrhizal symbioses in plants. Curr Biol. 2017;27(17): R952–R963. doi: 10.1016/j.cub.2017.06.042
- Fester T, Sawers R. Progress and challenges in agricultural applications of arbuscular mycorrhizal fungi. CRC Crit Rev Plant Sci. 2011;30(5):459–470. doi: 10.1080/07352689.2011.605741
- Ahanger MA, Hashem A, Abd-Allah EF, Ahmad P. Chapter 3. Arbuscular mycorrhiza in crop improvement under environmental stress. In: Emerging technologies and management of crop stress tolerance. Vol. 2. Academic Press; 2014. P. 69–95. doi: 10.1016/B978-0-12-800875-1.00003-X
- Latef AAHA, Hashem A, Rasool S, et al. Arbuscular mycorrhizal symbiosis and abiotic stress in plants: A review. J Plant Biology. 2016;59(5):407–426. doi: 10.1007/s12374-016-0237-7
- Rivero J, Álvarez D, Flors V, et al. Root metabolic plasticity underlies functional diversity in mycorrhiza-enhanced stress tolerance in tomato. New Phytologist. 2018;220(4):1322–1336. doi: 10.1111/nph.15295
- Jakobsen I, Smith SE, Smith FA. Function and diversity of arbuscular mycorrhizae in carbon and mineral nutrition. In: van der Heijden MGA, Sanders IR, editors. Mycorrhizal ecology. Ecological studies. Vol. 157. Berlin: Springer, Heidelberg; 2003. P. 75–92. doi: 10.1007/978-3-540-38364-2_3
- Van Der Heijden MGA. Arbuscular mycorrhizal fungi as a determinant of plant diversity: in search of underlying mechanisms and general principles. In: van der Heijden MGA, Sanders IR, editors. Mycorrhizal ecology. Ecological studies. Vol. 157. Berlin: Springer, Heidelberg; 2003. P. 243–265. doi: 10.1007/978-3-540-38364-2_10
- Klironomos JN. Variation in plant response to native and exotic arbuscular mycorrhizal fungi. Ecology. 2003;84(9):2292–2301. doi: 10.1890/02-0413
- Konvalinková T, Jansa J. Lights off for arbuscular mycorrhiza: On its symbiotic functioning under light deprivation. Front Plant Science. 2016;7:782. doi: 10.3389/fpls.2016.00782
- Kosterin OE. Pea (Pisum sativum L.): the uneasy fate of the first genetical object. Vavilov journal of genetics and breeding. 2015;19(1):13–26. EDN: TWQXOZ
- Sinyushin AA, Gostimsky SA. Achievements and prospects of using pea (Pisum sativum) as a model object in plant development genetics. Biology Bulletin Reviews. 2008;128(6):531–541. EDN: JUPCZN (In Russ.)
- Yakobi LM, Kukalev AS, Ushakov KV, et al. Polymorphism of seed pea forms on the efficiency of symbiosis with the endomycorrhizal fungus Glomus sp. under conditions of rhizobium inoculation. Agricultural biology. 2000;(3):94–102. EDN: YLBAPD (In Russ.)
- Zhukov VA, Zhernakov AI, Sulima AS, et al. Association study of symbiotic genes in pea (Pisum sativum L.) cultivars grown in symbiotic conditions. Agronomy. 2021;11(11):2368. doi: 0.3390/agronomy11112368
- Rivera-Becerril F, Calantzis C, Turnau K, et al. Cadmium accumulation and buffering of cadmium-induced stress by arbuscular mycorrhiza in three Pisum sativum L. genotypes. J Exp Bot. 2002;53(371):1177–1185. doi: 10.1093/jexbot/53.371.1177
- Xavier LJC, Germida JJ. Selective interactions between arbuscular mycorrhizal fungi and Rhizobium leguminosarum bv. viceae enhance pea yield and nutrition. Biol Fertil Soils. 2003;37(5):161–167. doi: 10.1007/s00374-003-0605-6
- Borisov AYu, Naumkina TS, Shtark OYu, et al. Effectiveness of combined inoculation of pea (Pisum sativum L.) with arbuscularmycorrhizal fungu and rhizobia. Bulletin of the Russian Academy of Agricultural Sciences. 2004;(2):12–13. EDN: PKBJBD
- Schweiger R, Baier MC, Persicke M, Müller C. High specificity in plant leaf metabolic responses to arbuscular mycorrhiza. Nat Commun. 2014;5:3886. doi: 10.1038/ncomms4886
- Desalegn G, Turetschek R, Kaul H-P, Wienkoop S. Microbial symbionts affect Pisum sativum proteome and metabolome under Didymella pinodes infection. J Proteomics. 2016;143:173–187. doi: 10.1016/j.jprot.2016.03.018
- Zhukov VA, Akhtemova GA, Zhernakov AI, et al. Evaluation of the symbiotic effectiveness of pea (Pisum sativum L.) genotypes in pot experiment. Agricultural Biology. 2017;52(3):607–614. EDN: YZKVLX doi: 10.15389/agrobiology.2017.3.607eng
- Shtark OY, Puzanskiy RK, Avdeeva GS, et al. Metabolic alterations in pea leaves during arbuscular mycorrhiza development. PeerJ. 2019;7: e7495. doi: 10.7717/peerj.7495
- Yurkov AP, Lactionov YuV, Kojemyakov AP, Stepanova GV. Symbiotic efficiency of bacterial and fungal preparations for forage crops according to seed harvest. Kormoproizvodstvo. 2017;(3):16–21. EDN: YGUNSX
- Müller LM, Harrison MJ. Phytohormones, miRNAs, and peptide signals integrate plant phosphorus status with arbuscular mycorrhizal symbiosis. Curr Opin Plant Biol. 2019;50:132–139. doi: 10.1016/j.pbi.2019.05.004
- Engvild KC. Nodulation and nitrogen fixation mutants of pea, Pisum sativum. Theor Appl Genet. 1987;74(6):711–713. doi: 10.1007/BF00247546
- Borisov AY, Danilova TN, Koroleva TA, Naumkina TS. Pea (Pisum sativum L.) regulatory genes controlling development of nitrogen-fixing nodule and arbuscular mycorrhiza: fundamentals and application. Biologia (Bratisl). 2004;59(S13):137–144.
- Kistner C, Winzer T, Pitzschke A, et al. Seven Lotus japonicus genes required for transcriptional reprogramming of the root during fungal and bacterial symbiosis. Plant Cell. 2005;17(8):2217–2229. doi: 10.1105/tpc.105.032714
- Shtark OY, Zhukov VA, Provorov NA, et al. Intimate associations of beneficial soil microbes with host plants. In: Dixon G, Tilston E, editors. Soil microbiology and sustainable crop production. Springer; 2010. P. 119–196. EDN: SLALLN doi: 10.1007/978-90-481-9479-7_5
- Kaló P, Gleason C, Edwards A, et al. Nodulation signaling in legumes requires NSP2, a member of the GRAS family of transcriptional regulators. Science. 2005;308(5729):1786–1789. doi: 10.1126/science.1110951
- Dolgikh EA, Leppyanen IV, Osipova MA, et al. Genetic dissection of Rhizobium-induced infection and nodule organogenesis in pea based on ENOD12A and ENOD5 expression analysis. Plant Biol. 2011;13(2):285–296. doi: 10.1111/j.1438-8677.2010.00372.x
- Shtark OY, Sulima AS, Zhernakov AI, et al. Arbuscular mycorrhiza development in pea (Pisum sativum L.) mutants impaired in five early nodulation genes including putative orthologs of NSP1 and NSP2. Symbiosis. 2016;68(1–3):129–144. doi: 10.1007/s13199-016-0382-2
- Liu W, Kohlen W, Lillo A, et al. Strigolactone biosynthesis in Medicago truncatula and rice requires the symbiotic GRAS-type transcription factors NSP1 and NSP2. Plant Cell. 2011;23(10):3853–3865. doi: 10.1105/tpc.111.089771
- Maillet F, Poinsot V, André O, et al. Fungal lipochitooligosaccharide symbiotic signals in arbuscular mycorrhiza. Nature. 2011;469(7328):58–63. doi: 10.1038/nature09622
- Delaux P-M, Bécard G, Combier J-P. NSP 1 is a component of the Myc signaling pathway. New Phytologist. 2013;199(1):59–65. doi: 10.1111/nph.12340
- Endre G, Kereszt A, Kevei Z, et al. A receptor kinase gene regulating symbiotic nodule development. Nature. 2002;417(6892): 962–966. doi: 10.1038/nature00842
- Stracke S, Kistner C, Yoshida S, et al. A plant receptor-like kinase required for both bacterial and fungal symbiosis. Nature. 2002;417(6892):959–962. doi: 10.1038/nature00841
- Marsh JF, Schultze M. Analysis of arbuscular mycorrhizas using symbiosis-defective plant mutants. New Phytologist. 2001;150(3):525–532. doi: 10.1046/j.1469-8137.2001.00140.x
- Demchenko K, Winzer T, Stougaard J, et al. Distinct roles of Lotus japonicus SYMRK and SYM15 in root colonization and arbuscule formation. New Phytologist. 2004;163(2):381–392. doi: 10.1111/j.1469-8137.2004.01123.x
- Muromtsev GS, Marshunova GA, Jacobi LM. Certificate of author No. 1501509 to invention: A strain of endomycorrhizal fungus Glomus mosseae Nic. & Gerd., increasing the yield of agricultural plants and improving their mineral nutrition. (In Russ.)
- Knott CM. A key for stages of development of the pea (Pisum sativum). Ann Appl Biol. 1987;111(1):233–245. doi: 10.1111/j.1744-7348.1987.tb01450.x
- Fox J. Applied regression analysis and generalized linear models. Sage Publications; 2015. 816 p.
- Vierheilig H, Coughlan AP, Wyss U, Piché Y. Ink and vinegar, a simple staining technique for arbuscular-mycorrhizal fungi. Appl Environ Microbiol Am Soc Microbiol. 1998;64(12):5004–5007. doi: 10.1128/AEM.64.12.5004-5007.1998
- Trouvelot A, Kough JL, Gianinazzi-Pearson V. Mesure du taux de mycorhization VA d’un système radiculaire. Recherche de méthodes d’estimation ayant une signification fonctionnelle. In: Gianinazzi-Pearson V, Gianinazzi S, editors. Physiological and genetical aspects of mycorrhizae. Paris: INRA, 1986. P. 217–221.
- Little TM, Hills FJ. Agricultural experimentation. Design and analysis. New York: John Wiley and Sons United States; 1978. 350 p.
- Kuznetsova E, Seddas-Dozolme PMA, Arnould C, et al. Symbiosis-related pea genes modulate fungal and plant gene expression during the arbuscule stage of mycorrhiza with Glomus intraradices. Mycorrhiza. 2010;20(6):427–443. doi: 10.1007/s00572-009-0292-8
- Nagae M, Takeda N, Kawaguchi M. Common symbiosis genes CERBERUS and NSP1 provide additional insight into the establishment of arbuscular mycorrhizal and root nodule symbioses in Lotus japonicus. Plant Signal Behav. 2014;9(5):e28544. doi: 10.4161/psb.28544
- Shtark OY, Zhukov VA, Tikhonovich IA, et al. Strigolactones as regulators of symbiotrophy of plants and microorganisms. Russian Journal of Plant Physiology. 2018;65(2):83–100. EDN: YSSSHV doi: 10.7868/S001533031802001X
- Smith SE, Jakobsen I, Grønlund M, Smith FA. Roles of arbuscular mycorrhizas in plant phosphorus nutrition: interactions between pathways of phosphorus uptake in arbuscular mycorrhizal roots have important implications for understanding and manipulating plant phosphorus acquisition. Plant Physiol Am Soc Plant Biol. 2011;156(3):1050–1057. doi: 10.1104/pp.111.174581
Supplementary files
