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Vol 61, No 7 (2025)

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ОБЗОРНЫЕ И ТЕОРЕТИЧЕСКИЕ СТАТЬИ

Mutations in the thyrotropin receptor gene: correlation between genetically altered structural elements of the thyrotropin receptor and functional disorders of the thyroid gland

Zubkov A.V., Svitich O.A., Fadeev V.V., Butova L.G.

Abstract

The thyroid-stimulating hormone receptor (TSHR), one of the main autoantigens of the thyroid gland (TG), along with thyroglobulin and thyroid peroxidase, plays a key role in the metabolism of thyroid hormones, controls the growth and functions of thyrocytes. Due to the heterogeneity of etiology and pathogenesis, there are many functional disorders of the thyroid gland caused by hyperthyroidism, hypothyroidism or thyroid tumors. This analytical review systematizes data from 1993 on mutations in the TSH gene, identified in the genome of patients with hyperthyroidism, hypothyroidism or thyroid tumors, on various domains of the TSH receptor, which has a unique structure for this family of receptors.

Genetika. 2025;61(7):3-28
pages 3-28 views

Unveiling the Molecular Basis of Comorbidity of Atherosclerosis and Aortic Aneurysm at the Cellular and Molecular Levels

Kucher A.N., Nazarenko M.S.

Abstract

Aortic aneurysm (AA) and atherosclerosis (AS) are characterized by ambiguous comorbid relationships between them. This review discusses the molecular mechanisms of formation of these pathologies caused by heterogeneity, plasticity, intercellular interactions, embryonic origin and regional specificity of arterial cells, revealed using the approach of single-cell transcriptomics in humans and in model animals. The importance of interplay of genetic and environmental factors that determine the functional state of blood vessels and the development of pathology through dynamic changes in the cellular composition of arteries within the framework of an ontogenetically regulated spatio-temporal continuum is emphasized, which creates conditions for the formation of comorbidity between diseases. Understanding the key molecular mechanisms underlying the comorbidity of AA and AS is important for the development of new therapeutic strategies for these pathological conditions.

Genetika. 2025;61(7):29-48
pages 29-48 views

МОЛЕКУЛЯРНАЯ ГЕНЕТИКА

Diversity and evolution of the repetitive element repertoire in two subspecies of honey bee Apis mellifera

Lebedev E.E., Panyushev N.V., Adonin L.S.

Abstract

The present study attempts to determine the contribution of repetitive DNA sequences to the formation of social structures in Apis mellifera honeybees. Despite progress in understanding the molecular basis of caste formation, particularly related to the Notch signaling pathway, the identification of genome-specific cis-regulatory elements remains incomplete. The present work focuses on characterizing the landscape of repetitive elements in the genomes of two honeybee subspecies, A. m. mellifera and A. m. ligustica. The study revealed that the increased copy number of mobile genetic elements in A. m. ligustica is a significant difference between the two subspecies. Furthermore, differentially expressed repetitive elements with the potential for cis-regulatory functions were identified. Concurrently, the analysis of the transcriptome showed minimal differences in the expression of mobile elements during caste differentiation, a fundamental process in the eusocial organisation of bees. Furthermore, the analysis of transposon divergence between subspecies indicated consistent changes in their repeat status correlating with time of origin. Taken together, the findings indicate a potential role of repetitive elements in the acquisition of new regulatory functions, which opens new perspectives for understanding the molecular mechanisms of honey bee social behaviour.

Genetika. 2025;61(7):49-60
pages 49-60 views

ГЕНЕТИКА РАСТЕНИЙ

Sequencing of the chloroplast genome of different forms of Triticum militinae Zhuk. et Migusch.

Kuluev A.R., Matniyazov R.T., Kuluev B.R., Privalov L.Y., Chemeris A.V.

Abstract

The tetraploid wheat of Militinae (Triticum militinae Zhuk. et Migusch.) has been considered by some researchers to be a natural naked mutant of the hulled wheat T. timopheevii (Zhuk.) Zhuk. The present study reports the sequencing and annotation of the chloroplast genomes of the white-spiked (k-64829) and black-spiked (k-46007) forms of T. militinae, which were 135899 and 136163 bp in size, respectively. Sequencing was performed on a SURFSeq sequencer (GeneMind, China) and the chloroplast genomes were assembled using the NOVOWrap software. The phylogenetic tree constructed basis of the alignment of complete chloroplast genomes (plastomes) showed that the black-spiked form of T. militinae k-46007 is close to the Timopheevii lineage, whereas the white-spiked form k-64829 is close to the Emmer lineage, including the species Triticum persicum Vav. (syn. T. carthlicum Nevski). The question of the origin of different forms and lines of T. militinae and their authenticity is discussed.

Genetika. 2025;61(7):61-70
pages 61-70 views

Effect of cold stress on anthocyanin content and anthocyanin biosynthesis pathway gene expression in potato Solanum tuberosum L. leaves

Bykova A.V., Meleshin A.A., Shchennikova A.V., Kochieva E.Z.

Abstract

Cold stress has a negative effect on the ontogenesis of plants, which cold resistance is associated, among other things, with the accumulation of anthocyanins with antioxidant activity. The aim of this work was to analyze the cold stress effect on the content of anthocyanins and the regulation of anthocyanins biosynthesis in potato (Solanum tuberosum L.). In the leaves of the cv. Lady Claire plants, subjected to a two-day low-temperature exposure followed by a recovery period, the expression of the anthocyanins biosynthesis genes was determined in the dynamics of the experiment. Significant activation of regulatory (StHY5, StJAF13) and structural (StCHS2, StCHI, StF3H, StDFR) genes of the pathway was revealed at the beginning of the stress and by the end of the recovery phase. Expression of the structural gene StANS did not change. In the same leaves, the content of anthocyanins was determined and its increase was shown at the beginning and end of cold stress. Similar dynamics of gene expression (except StANS) was found to be consistent with fluctuations in anthocyanin levels. Overall, it was demonstrated that lower temperatures stimulated the expression of anthocyanin biosynthesis genes and anthocyanin accumulation in potato leaves. The data obtained may contribute to understanding the molecular mechanism of anthocyanin biosynthesis regulation in response to abiotic stresses.

Genetika. 2025;61(7):71-82
pages 71-82 views

ГЕНЕТИКА ЖИВОТНЫХ

Dqa1 gene variability in wild and domestic reindeer (Rangifer tarandus) of the Asian part of Russia

Konorov E.A., Kurbakov K.A., Semina M.T., Voronkova V.N., Onokhov A.A., Layshev K.A.

Abstract

Modern tendencies to intensification of breeding of domestic farm animals including reindeer necessitate a detailed study of genetic variability in candidate genes associated with meat productivity. At present, the primary task is to search for molecular genetic markers for identification and selection of individuals with desired characteristics. One such potential candidate gene is the DQA1 gene. It is hypothesized that individual genes of the immune system may influence the growth performance of animals. Variability in the DQA1 gene region has been associated with cattle size and beef production in many studies. Principal component analysis on DQA1 variability united wild and domestic reindeer in Yakutia, which implies gene flow between local breeds of domesticated reindeer and wild populations, and the formation of similar adaptation mechanisms. However, significant differences were found between wild and Evenki reindeer of the Amur region, which may reflect the influence of domestication processes on the Evenki breed.

Genetika. 2025;61(7):83-90
pages 83-90 views

МАТЕМАТИЧЕСКИЕ МОДЕЛИ И МЕТОДЫ

Prediction of reproducibility of effects for regressions based on top predictors

Rubanovich A.V.

Abstract

Two simple methods for predicting the reproducibility of effects in test samples after multiple regression analysis of the discovery sample are proposed. In particular, the method allows us to assess the feasibility of constructing efficient polygenic risk indices (PRS, PGS). Using the theory of ordinal statistics, we obtained a simple analytical formula that estimates the coefficient of determination for the model constructed for the top neutral indices (). This is the coefficient of determination under the null hypothesis, which depends only on the sample size, the total number of indicators studied (e.g., snips or CpG methylation levels), and the number of top indicators chosen to construct the regression. Comparing the observed multiple correlation square for the discovery sample with . Allows a reasonably confident prediction of the reproducibility of effects in the test samples. If the observed correlation square for the discovery sample is 1.3 times , then at least half of the original correlation square can be expected in the test samples. The second method is based on a similar comparison of the maximum correlation coefficient for the discovery sample with the expected maximum correlation for neutral traits.

Genetika. 2025;61(7):91-99
pages 91-99 views

КРАТКИЕ СООБЩЕНИЯ

Prevalence of allele variants of ADAM33 (rs2280090) and ADRB2 (rs1042714) in Siberian populations

Afonicheva K.V., Tereshchenko S.Y., Smolnikova M.V.

Abstract

The article addressed to the study of polymorphic variants of the rs2280090 ADAM33 and rs1042714 ADRB2 genes associated with a predisposition to bronchial asthma in the population of Eastern Siberia (Russian), Khakassia (Khakass) and Tuva (Tuvans). It was found that the AG genotype and the A allele of rs2280090 ADAM33 are more common among Russians compared with Tuvans. Also it was detected that the G rs1042717 ADRB2 allele is significantly more common in Russians relative to Khakas, while the prevalence of the GG genotype is higher in Tuvans compared to Khakas. The findings highlight the importance of ethnic differences in predisposition to bronchial asthma and may be useful for developing strategies for the prevention and treatment of this disease.

Genetika. 2025;61(7):100-105
pages 100-105 views

The effect of low-temperature exposure in embryogenesis on the expression of the stk25, ndufa4, and adipoq genes in chickens

Fedorova E.S., Pozovnikova M.V.

Abstract

It is known that stressors of early on to genesis can affect long-termadaptive changes in the body. In the studies, the stress factor was dosed low-temperature exposure in the early embryogenesis of chickens (Amroxbreed), for which the embryos of the experimental group were cooled on the 5th day of incubation for 6 hours at +15°C. The degree of activation of key candidate genes involved in thermoregulation processes was assessed by the level of the irrelative expression in 14-day-old chickens (10 heads each in the experiment and in the control) 3 hours after the "provocative" stress factor exposure (+7°C, 1 hour) to chickens of both groups. The main purpose of the research h was to verify the involvement of the NDUFA4, STK25, and ADIPOQ genes in chicken thermoregulation and to establish the possibility of controlling the processes of thermal adaptation of chickens in early ontogenesis through dosed low-temperature exposure. It has been established that even a single cold exposure (at temperatures below biological zero) during embryogenes is canin crease the adaptive capabilities of 14-day-old chicks. Thus, the blood of chickens in the experimental group contained less triglycerides (by 35%) and glucose (by 26%) against the background of repeated cooling (p < 0.01). Chickens of both groups activated the mechanism of cold shivering, but in the control, an increase in hypothermialed to ataxia. Thechicks of the experimental group had a shift in the body's response to coldstress (towards increased thermal tolerance), therefore, to main ta in temperature homeostasis, they mainly used the mechanisms of non-shivering thermogenesis, which was accompanied by increased expression of the NDUFA4, STK25, and ADIPOQ genes (1.4–2.1 timesrelative to the control, p < 0.05) in their pectoral muscle.

Genetika. 2025;61(7):106-110
pages 106-110 views